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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.0
nTPM
Monaco:
29.4
nTPM
Schmiedel:
12.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.0
HPA sample
nTPM
gdT-cell nTPM: 23.8
Samples: 6
Max nTPM: 33.6
Min nTPM: 18.6
P10809_1007
33.6
P10809_1022
19.0
P10809_1041
23.4
P10809_1060
18.6
P10809_1077
20.9
P10809_1098
27.2
MAIT T-cell nTPM: 21.6
Samples: 6
Max nTPM: 30.4
Min nTPM: 7.4
P10809_1006
30.1
P10809_1024
7.4
P10809_1043
30.4
P10809_1062
25.4
P10809_1083
16.2
P10809_1097
20.1
Memory CD4 T-cell nTPM: 23.3
Samples: 6
Max nTPM: 28.6
Min nTPM: 16.8
P10809_1014
28.6
P10809_1026
24.8
P10809_1045
26.1
P10809_1064
21.5
P10809_1086
16.8
P10809_1113
22.0
Memory CD8 T-cell nTPM: 24.4
Samples: 5
Max nTPM: 30.7
Min nTPM: 18.6
P10809_1012
30.7
P10809_1027
22.6
P10809_1046
29.9
P10809_1065
20.1
P10809_1111
18.6
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 32.1
Min nTPM: 22.5
P10809_1015
30.4
P10809_1030
25.3
P10809_1049
32.1
P10809_1068
29.3
P10809_1085
22.5
P10809_1112
28.0
Naive CD8 T-cell nTPM: 22.1
Samples: 6
Max nTPM: 28.6
Min nTPM: 18.1
P10809_1016
28.6
P10809_1031
21.0
P10809_1050
19.6
P10809_1069
22.0
P10809_1087
23.2
P10809_1110
18.1
T-reg nTPM: 71.0
Samples: 6
Max nTPM: 92.4
Min nTPM: 52.5
P10809_1018
92.4
P10809_1037
54.0
P10809_1056
82.1
P10809_1075
52.5
P10809_1094
76.9
P10809_1106
68.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.9
Samples: 4
Max nTPM: 31.4
Min nTPM: 4.6
RHH5202_R3573
11.9
RHH5230_R3602
4.6
RHH5259_R3631
19.8
RHH5288_R3660
31.4
Effector memory CD8 T-cell nTPM: 17.3
Samples: 4
Max nTPM: 33.1
Min nTPM: 9.1
RHH5203_R3574
33.1
RHH5231_R3603
13.4
RHH5260_R3632
13.4
RHH5289_R3661
9.1
MAIT T-cell nTPM: 15.1
Samples: 4
Max nTPM: 21.9
Min nTPM: 8.1
RHH5233_R3605
11.9
RHH5205_R3576
18.3
RHH5262_R3634
8.1
RHH5297_R3663
21.9
Memory CD4 T-cell TFH nTPM: 19.7
Samples: 4
Max nTPM: 25.4
Min nTPM: 14.9
RHH5300_R3666
23.4
RHH5236_R3608
15.0
RHH5265_R3637
14.9
RHH5208_R3579
25.4
Memory CD4 T-cell Th1 nTPM: 20.7
Samples: 4
Max nTPM: 42.7
Min nTPM: 9.3
RHH5210_R3581
9.3
RHH5302_R3668
42.7
RHH5238_R3610
19.3
RHH5267_R3639
11.6
Memory CD4 T-cell Th1/Th17 nTPM: 17.0
Samples: 4
Max nTPM: 23.3
Min nTPM: 13.4
RHH5303_R3669
23.3
RHH5211_R3582
13.4
RHH5239_R3611
17.8
RHH5268_R3640
13.4
Memory CD4 T-cell Th17 nTPM: 12.5
Samples: 4
Max nTPM: 15.3
Min nTPM: 5.9
RHH5304_R3670
15.3
RHH5212_R3583
14.3
RHH5240_R3612
14.4
RHH5269_R3641
5.9
Memory CD4 T-cell Th2 nTPM: 13.0
Samples: 4
Max nTPM: 16.8
Min nTPM: 5.0
RHH5305_R3671
16.8
RHH5213_R3584
5.0
RHH5241_R3613
16.6
RHH5270_R3642
13.6
Naive CD4 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 24.4
Min nTPM: 13.4
RHH5306_R3672
15.8
RHH5214_R3585
24.4
RHH5242_R3614
13.4
RHH5271_R3643
24.4
Naive CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 18.9
Min nTPM: 6.2
RHH5201_R3572
8.8
RHH5229_R3601
9.5
RHH5258_R3630
6.2
RHH5287_R3659
18.9
Non-Vd2 gdTCR nTPM: 29.4
Samples: 4
Max nTPM: 50.9
Min nTPM: 15.4
RHH5235_R3607
19.0
RHH5264_R3636
32.4
RHH5207_R3578
15.4
RHH5299_R3665
50.9
T-reg nTPM: 23.4
Samples: 4
Max nTPM: 34.8
Min nTPM: 16.5
RHH5301_R3667
34.8
RHH5237_R3609
20.4
RHH5266_R3638
16.5
RHH5209_R3580
22.0
Terminal effector memory CD4 T-cell nTPM: 19.3
Samples: 2
Max nTPM: 29.5
Min nTPM: 9.0
RHH5243_R3615
29.5
RHH5272_R3644
9.0
Terminal effector memory CD8 T-cell nTPM: 27.3
Samples: 4
Max nTPM: 49.8
Min nTPM: 10.8
RHH5232_R3604
25.5
RHH5204_R3575
49.8
RHH5261_R3633
10.8
RHH5296_R3662
23.1
Vd2 gdTCR nTPM: 24.2
Samples: 4
Max nTPM: 28.3
Min nTPM: 21.0
RHH5234_R3606
23.6
RHH5206_R3577
23.7
RHH5263_R3635
21.0
RHH5298_R3664
28.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
