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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
20563.1
nTPM
HPA Brain:
8506.5
nTPM
GTEx:
20563.1
nTPM
FANTOM5:
5781.0
Scaled Tags Per Million
Pig:
7007.8
nTPM
Mouse:
3474.4
nTPM
Allen mouse:
9.4
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
20563.1
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 20563.1
Samples: 197
Max nTPM: 109429.5
Min nTPM: 556.4
Std nTPM: 14992.9
Median nTPM: 16862.1
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
109429.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
82230.6
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
64677.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
64632.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
61653.8
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
58370.5
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
58264.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
57275.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
57011.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
56306.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
49336.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
45117.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
42856.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
41405.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
40947.8
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
40731.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
39673.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
39020.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
38697.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
38238.9
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
38097.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
37958.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
36774.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
36688.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
36096.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
35055.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
34815.7
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
34277.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
33666.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
32591.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
32475.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
31995.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
31669.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
31515.5
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
31272.4
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
30980.1
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
30867.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
30859.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
29754.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
29510.4
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
28829.3
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
28550.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
27720.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
27671.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
27619.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
27123.9
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
26473.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
26262.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
26060.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
25796.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
25201.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
25154.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
24892.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
24589.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
24576.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
24408.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
23721.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
23447.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
23135.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
23024.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
22797.6
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
22488.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
21990.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
21944.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
21804.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
21587.9
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
21587.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
21292.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
21249.3
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
21069.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
21002.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
20707.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
20409.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
20380.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
20330.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
20187.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
20109.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
20005.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
19740.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
19534.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
19527.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
19191.4
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
18951.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
18941.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
18444.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
18329.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
18278.1
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
18092.5
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
18008.3
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
17889.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
17866.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
17751.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
17747.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
17620.1
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
17423.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
17271.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
17207.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
17199.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
16862.1
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
16595.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
16360.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
16347.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
16111.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
16077.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
15857.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
15558.6
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
15473.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
15451.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
15395.8
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
15294.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
15128.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
14852.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
14688.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
14453.1
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
14411.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
14410.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
14275.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
14231.0
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
14215.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
14085.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
14074.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
13984.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
13931.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
13802.2
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
13773.8
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
13753.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
13473.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
13409.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
13276.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
13058.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
12724.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
12685.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
12601.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
12356.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
12346.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
12340.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
12157.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
12129.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
12111.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
11712.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
11611.7
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
11542.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
11455.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
11287.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
11230.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
11217.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
10447.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
10333.0
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
10256.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
10245.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
10132.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
10127.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
10047.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
10000.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
9891.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
9887.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
9843.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
9695.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
9141.3
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
8998.2
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
8990.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
8887.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
8816.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
8790.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
8747.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
8700.6
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
8678.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
8670.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
8616.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
8592.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
8488.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
7638.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
7367.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
7313.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
7240.1
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
7046.0
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
6945.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
6871.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
6869.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
6364.8
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
6091.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
6054.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
6032.5
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
5903.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
5870.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
5788.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
4875.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
4790.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
4646.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
4328.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
4242.4
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
4185.6
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
3721.5
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
3533.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
2620.9
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
1811.1
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
556.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
3474.4
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 1652.8
Samples: 4
Max nTPM: 2367.1
Min nTPM: 660.8
Sample A
Male
2367.1
Sample B
Male
1744.2
Sample C
Female
1838.9
Sample D
Female
660.8
Hippocampal formation nTPM: 3474.4
Samples: 4
Max nTPM: 4922.9
Min nTPM: 2532.5
Sample A
Male
2532.5
Sample B
Male
2832.2
Sample C
Female
4922.9
Sample D
Female
3610.1
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.