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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
288.3
nTPM
FANTOM5:
211.6
Scaled Tags Per Million
Pig:
47.1
nTPM
Allen mouse:
1.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
288.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 229.3
2188
Female, age 91, both hemispheres
303.7
2301
Female, age 85, both hemispheres
251.3
2090
Male, age 80, both hemispheres
246.6
1984
Male, age 76, both hemispheres
115.9
Dorsal cochlear nucleus nTPM: 236.3
2378
Male, age 80, both hemispheres
271.7
2370
Male, age 61, both hemispheres
251.9
2187
Female, age 91, both hemispheres
229.2
2802
Male, age 74, right hemisphere
228.9
2058
Male, age 76, both hemispheres
200.1
Dorsal tegmental nucleus nTPM: 212.5
2083
Male, age 80, both hemispheres
266.8
2326
Male, age 74, both hemispheres
215.1
1936
Male, age 76, left hemisphere
191.1
2358
Male, age 61, both hemispheres
176.7
Dorsolateral tegmental area nTPM: 206.9
2654
Male, age 80, both hemispheres
284.3
2751
Female, age 85, both hemispheres
257.2
2337
Male, age 61, both hemispheres
233.2
2360
Male, age 74, both hemispheres
140.0
2141
Male, age 76, both hemispheres
119.6
Kolliker-Fuse nucleus nTPM: 217.1
2793
Female, age 91, left hemisphere
308.1
2163
Male, age 80, both hemispheres
220.5
2315
Male, age 76, right hemisphere
122.6
Lateral lemniscal nuclei nTPM: 191.5
2320
Female, age 91, left hemisphere
254.2
2036
Male, age 80, both hemispheres
223.9
2169
Male, age 76, both hemispheres
181.4
2453
Male, age 74, right hemisphere
150.9
2746
Female, age 85, left hemisphere
146.9
Lateral parabrachial nucleus nTPM: 241.7
2792
Male, age 76, both hemispheres
316.1
2790
Male, age 61, both hemispheres
277.6
2013
Male, age 80, both hemispheres
238.3
2139
Female, age 85, right hemisphere
134.7
Lateral vestibular nucleus nTPM: 223.4
2311
Male, age 80, both hemispheres
244.0
2184
Male, age 76, both hemispheres
202.8
Locus coeruleus nTPM: 125.0
2720
Male, age 74, both hemispheres
212.4
2162
Male, age 80, both hemispheres
177.6
2317
Female, age 72, unknown
118.2
2014
Male, age 55, unknown
101.3
2123
Female, age 91, both hemispheres
97.0
2788
Male, age 74, unknown
91.6
1980
Male, age 76, both hemispheres
76.8
Medial parabrachial nucleus nTPM: 240.5
2156
Male, age 61, both hemispheres
299.0
2170
Female, age 91, both hemispheres
250.3
2463
Female, age 85, right hemisphere
230.1
2786
Male, age 76, both hemispheres
226.5
2854
Male, age 80, both hemispheres
196.7
Medial periolivary nuclei nTPM: 174.5
2458
Female, age 91, both hemispheres
227.6
2081
Male, age 80, both hemispheres
218.4
2063
Male, age 76, both hemispheres
171.9
2791
Male, age 74, right hemisphere
127.6
2171
Female, age 85, both hemispheres
127.0
Motor facial nucleus nTPM: 192.2
2697
Female, age 85, both hemispheres
258.1
2327
Male, age 80, both hemispheres
237.6
2795
Female, age 91, both hemispheres
199.3
2126
Male, age 61, both hemispheres
190.8
2365
Male, age 74, right hemisphere
138.4
2062
Male, age 76, both hemispheres
129.0
Motor trigeminal nucleus nTPM: 217.1
2321
Female, age 91, both hemispheres
258.4
2309
Male, age 76, both hemispheres
245.1
2335
Male, age 61, both hemispheres
200.4
2079
Male, age 80, both hemispheres
194.4
2560
Male, age 74, both hemispheres
187.1
Nuclei of the trapezoid body nTPM: 177.6
2166
Male, age 80, both hemispheres
260.5
2368
Female, age 91, both hemispheres
211.6
1983
Male, age 76, both hemispheres
158.8
2159
Male, age 61, both hemispheres
154.0
2735
Female, age 85, both hemispheres
103.3
Nucleus raphe magnus nTPM: 168.9
2328
Male, age 80, both hemispheres
261.3
2459
Female, age 91, both hemispheres
231.9
2051
Male, age 76, both hemispheres
186.5
2455
Male, age 74, both hemispheres
134.4
2160
Male, age 61, both hemispheres
102.2
2172
Female, age 85, both hemispheres
96.9
Paramedian reticular nucleus nTPM: 211.9
2052
Male, age 76, both hemispheres
280.8
2057
Male, age 80, both hemispheres
221.7
2313
Male, age 61, both hemispheres
190.7
2050
Female, age 85, both hemispheres
154.5
Pedunculopontine tegmental nucleus nTPM: 197.9
2334
Male, age 80, both hemispheres
220.8
2338
Male, age 61, both hemispheres
202.4
1921
Female, age 85, both hemispheres
170.3
Pontine nuclei nTPM: 190.4
2319
Female, age 91, both hemispheres
282.2
2115
Male, age 80, left hemisphere
235.5
1968
Male, age 76, left hemisphere
218.8
2454
Male, age 74, left hemisphere
193.7
1863
Male, age 55, unknown
188.4
2109
Female, age 72, unknown
167.6
2787
Female, age 85, both hemispheres
127.5
2727
Male, age 61, right hemisphere
109.8
Pontine raphe nucleus nTPM: 145.2
2853
Male, age 76, midline
149.9
2122
Female, age 85, midline
140.4
Posteroventral cochlear nucleus nTPM: 288.3
2341
Male, age 80, both hemispheres
371.3
2135
Female, age 91, both hemispheres
348.9
2371
Male, age 61, both hemispheres
313.8
2070
Male, age 76, both hemispheres
223.6
2752
Female, age 85, both hemispheres
184.1
Principal sensory trigeminal nucleus nTPM: 184.1
2367
Female, age 91, left hemisphere
243.4
2324
Male, age 76, both hemispheres
206.5
2008
Male, age 80, left hemisphere
149.0
2158
Male, age 61, both hemispheres
137.7
Reticular pontine nucleus, caudal nTPM: 220.2
2457
Female, age 91, both hemispheres
255.5
2559
Male, age 74, both hemispheres
220.9
2092
Male, age 76, both hemispheres
220.4
2332
Male, age 80, right hemisphere
183.8
Reticular pontine nucleus, oral nTPM: 230.7
2366
Female, age 91, both hemispheres
314.1
1939
Male, age 80, both hemispheres
252.7
2167
Male, age 76, both hemispheres
251.1
2012
Female, age 85, both hemispheres
190.3
2361
Male, age 74, both hemispheres
145.4
Reticulotegmental nucleus nTPM: 212.5
2452
Male, age 74, both hemispheres
240.7
2322
Female, age 91, both hemispheres
234.8
2333
Male, age 80, both hemispheres
229.9
2325
Male, age 76, both hemispheres
144.5
Spinal trigeminal nucleus, oral nTPM: 187.7
2164
Male, age 80, both hemispheres
218.1
1978
Male, age 76, both hemispheres
211.5
2737
Female, age 85, both hemispheres
133.5
Subcoeruleus area nTPM: 218.2
2369
Female, age 85, left hemisphere
300.2
2451
Male, age 74, both hemispheres
251.7
2089
Male, age 76, left hemisphere
195.4
1958
Male, age 80, both hemispheres
187.7
2323
Female, age 91, left hemisphere
156.0
Superior olive nTPM: 206.9
2020
Male, age 76, both hemispheres
286.3
2329
Male, age 80, right hemisphere
241.4
2561
Female, age 91, both hemispheres
233.2
1875
Female, age 85, both hemispheres
147.6
2364
Male, age 74, right hemisphere
126.0
Ventral periolivary nuclei nTPM: 197.7
2023
Male, age 76, both hemispheres
279.1
2165
Male, age 80, both hemispheres
206.4
2794
Female, age 91, left hemisphere
190.1
2130
Female, age 85, both hemispheres
115.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 195.3
2456
Female, age 91, both hemispheres
236.2
2161
Male, age 80, both hemispheres
219.3
2359
Male, age 61, both hemispheres
210.5
1959
Male, age 76, both hemispheres
198.0
2840
Female, age 85, both hemispheres
179.2
2449
Male, age 74, both hemispheres
128.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
47.1
Pig sample
Sample description
nTPM
Pons nTPM: 47.2
Samples: 4
Max nTPM: 68.8
Min nTPM: 35.5
Sample A
Female
38.6
Sample B
Female
35.5
Sample C
Male
45.7
Sample D
Male
68.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
