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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.3
nTPM
Monaco:
62.6
nTPM
Schmiedel:
73.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.3
HPA sample
nTPM
gdT-cell nTPM: 33.4
Samples: 6
Max nTPM: 46.8
Min nTPM: 8.3
P10809_1007
40.0
P10809_1022
33.6
P10809_1041
40.0
P10809_1060
8.3
P10809_1077
46.8
P10809_1098
31.4
MAIT T-cell nTPM: 32.8
Samples: 6
Max nTPM: 53.1
Min nTPM: 15.5
P10809_1006
37.1
P10809_1024
15.5
P10809_1043
47.2
P10809_1062
17.5
P10809_1083
26.2
P10809_1097
53.1
Memory CD4 T-cell nTPM: 35.1
Samples: 6
Max nTPM: 55.2
Min nTPM: 8.1
P10809_1014
37.2
P10809_1026
46.7
P10809_1045
55.2
P10809_1064
44.7
P10809_1086
18.9
P10809_1113
8.1
Memory CD8 T-cell nTPM: 35.6
Samples: 5
Max nTPM: 56.5
Min nTPM: 25.7
P10809_1012
33.2
P10809_1027
25.7
P10809_1046
56.5
P10809_1065
30.0
P10809_1111
32.7
Naive CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 44.8
Min nTPM: 21.5
P10809_1015
26.7
P10809_1030
35.5
P10809_1049
44.8
P10809_1068
24.7
P10809_1085
31.9
P10809_1112
21.5
Naive CD8 T-cell nTPM: 30.6
Samples: 6
Max nTPM: 41.2
Min nTPM: 9.9
P10809_1016
28.4
P10809_1031
34.2
P10809_1050
40.2
P10809_1069
41.2
P10809_1087
9.9
P10809_1110
29.6
T-reg nTPM: 36.3
Samples: 6
Max nTPM: 105.1
Min nTPM: 5.5
P10809_1018
21.2
P10809_1037
36.0
P10809_1056
105.1
P10809_1075
26.1
P10809_1094
5.5
P10809_1106
24.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.8
Samples: 4
Max nTPM: 52.2
Min nTPM: 4.7
RHH5202_R3573
4.7
RHH5230_R3602
52.2
RHH5259_R3631
42.8
RHH5288_R3660
19.5
Effector memory CD8 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 51.7
Min nTPM: 4.1
RHH5203_R3574
23.7
RHH5231_R3603
51.7
RHH5260_R3632
26.3
RHH5289_R3661
4.1
MAIT T-cell nTPM: 32.6
Samples: 4
Max nTPM: 51.8
Min nTPM: 22.3
RHH5233_R3605
22.3
RHH5205_R3576
29.4
RHH5262_R3634
51.8
RHH5297_R3663
27.0
Memory CD4 T-cell TFH nTPM: 43.8
Samples: 4
Max nTPM: 75.6
Min nTPM: 3.8
RHH5300_R3666
66.1
RHH5236_R3608
75.6
RHH5265_R3637
29.8
RHH5208_R3579
3.8
Memory CD4 T-cell Th1 nTPM: 35.3
Samples: 4
Max nTPM: 47.9
Min nTPM: 23.9
RHH5210_R3581
26.7
RHH5302_R3668
23.9
RHH5238_R3610
47.9
RHH5267_R3639
42.7
Memory CD4 T-cell Th1/Th17 nTPM: 38.2
Samples: 4
Max nTPM: 63.4
Min nTPM: 12.6
RHH5303_R3669
12.6
RHH5211_R3582
63.4
RHH5239_R3611
32.3
RHH5268_R3640
44.4
Memory CD4 T-cell Th17 nTPM: 33.1
Samples: 4
Max nTPM: 63.3
Min nTPM: 12.2
RHH5304_R3670
12.2
RHH5212_R3583
63.3
RHH5240_R3612
14.2
RHH5269_R3641
42.7
Memory CD4 T-cell Th2 nTPM: 47.0
Samples: 4
Max nTPM: 60.6
Min nTPM: 33.8
RHH5305_R3671
40.8
RHH5213_R3584
60.6
RHH5241_R3613
33.8
RHH5270_R3642
52.6
Naive CD4 T-cell nTPM: 43.0
Samples: 4
Max nTPM: 60.2
Min nTPM: 30.7
RHH5306_R3672
49.5
RHH5214_R3585
60.2
RHH5242_R3614
30.7
RHH5271_R3643
31.7
Naive CD8 T-cell nTPM: 34.0
Samples: 4
Max nTPM: 61.6
Min nTPM: 3.8
RHH5201_R3572
3.8
RHH5229_R3601
30.5
RHH5258_R3630
40.1
RHH5287_R3659
61.6
Non-Vd2 gdTCR nTPM: 36.5
Samples: 4
Max nTPM: 70.7
Min nTPM: 15.0
RHH5235_R3607
43.6
RHH5264_R3636
16.6
RHH5207_R3578
15.0
RHH5299_R3665
70.7
T-reg nTPM: 62.6
Samples: 4
Max nTPM: 81.1
Min nTPM: 49.2
RHH5301_R3667
63.5
RHH5237_R3609
81.1
RHH5266_R3638
49.2
RHH5209_R3580
56.5
Terminal effector memory CD4 T-cell nTPM: 41.9
Samples: 2
Max nTPM: 50.0
Min nTPM: 33.7
RHH5243_R3615
50.0
RHH5272_R3644
33.7
Terminal effector memory CD8 T-cell nTPM: 32.0
Samples: 4
Max nTPM: 48.7
Min nTPM: 6.1
RHH5232_R3604
38.6
RHH5204_R3575
48.7
RHH5261_R3633
34.6
RHH5296_R3662
6.1
Vd2 gdTCR nTPM: 41.3
Samples: 4
Max nTPM: 65.1
Min nTPM: 21.5
RHH5234_R3606
48.7
RHH5206_R3577
29.8
RHH5263_R3635
21.5
RHH5298_R3664
65.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
