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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.6
nTPM
Monaco:
127.1
nTPM
Schmiedel:
135.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.6
HPA sample
nTPM
gdT-cell nTPM: 62.7
Samples: 6
Max nTPM: 79.2
Min nTPM: 49.3
P10809_1007
51.6
P10809_1022
79.2
P10809_1041
72.7
P10809_1060
49.3
P10809_1077
65.0
P10809_1098
58.4
MAIT T-cell nTPM: 75.0
Samples: 6
Max nTPM: 104.8
Min nTPM: 57.3
P10809_1006
67.1
P10809_1024
92.5
P10809_1043
57.3
P10809_1062
66.0
P10809_1083
62.0
P10809_1097
104.8
Memory CD4 T-cell nTPM: 62.8
Samples: 6
Max nTPM: 67.4
Min nTPM: 56.5
P10809_1014
63.1
P10809_1026
60.7
P10809_1045
67.3
P10809_1064
56.5
P10809_1086
61.6
P10809_1113
67.4
Memory CD8 T-cell nTPM: 64.7
Samples: 5
Max nTPM: 78.5
Min nTPM: 49.9
P10809_1012
61.3
P10809_1027
75.7
P10809_1046
49.9
P10809_1065
57.9
P10809_1111
78.5
Naive CD4 T-cell nTPM: 56.0
Samples: 6
Max nTPM: 61.5
Min nTPM: 46.2
P10809_1015
60.4
P10809_1030
51.9
P10809_1049
46.2
P10809_1068
61.5
P10809_1085
58.0
P10809_1112
58.1
Naive CD8 T-cell nTPM: 64.4
Samples: 6
Max nTPM: 77.6
Min nTPM: 46.8
P10809_1016
63.8
P10809_1031
77.6
P10809_1050
46.8
P10809_1069
70.9
P10809_1087
60.9
P10809_1110
66.6
T-reg nTPM: 77.6
Samples: 6
Max nTPM: 98.1
Min nTPM: 42.9
P10809_1018
69.3
P10809_1037
93.3
P10809_1056
42.9
P10809_1075
87.0
P10809_1094
75.2
P10809_1106
98.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 100.9
Samples: 4
Max nTPM: 116.7
Min nTPM: 73.5
RHH5202_R3573
116.7
RHH5230_R3602
103.7
RHH5259_R3631
73.5
RHH5288_R3660
109.8
Effector memory CD8 T-cell nTPM: 126.3
Samples: 4
Max nTPM: 148.3
Min nTPM: 95.2
RHH5203_R3574
146.7
RHH5231_R3603
114.8
RHH5260_R3632
95.2
RHH5289_R3661
148.3
MAIT T-cell nTPM: 120.2
Samples: 4
Max nTPM: 144.3
Min nTPM: 105.1
RHH5233_R3605
111.1
RHH5205_R3576
105.1
RHH5262_R3634
144.3
RHH5297_R3663
120.1
Memory CD4 T-cell TFH nTPM: 100.0
Samples: 4
Max nTPM: 116.6
Min nTPM: 85.2
RHH5300_R3666
85.2
RHH5236_R3608
90.2
RHH5265_R3637
116.6
RHH5208_R3579
108.0
Memory CD4 T-cell Th1 nTPM: 89.3
Samples: 4
Max nTPM: 95.8
Min nTPM: 86.1
RHH5210_R3581
86.6
RHH5302_R3668
95.8
RHH5238_R3610
86.1
RHH5267_R3639
88.5
Memory CD4 T-cell Th1/Th17 nTPM: 98.6
Samples: 4
Max nTPM: 112.7
Min nTPM: 77.4
RHH5303_R3669
112.7
RHH5211_R3582
109.9
RHH5239_R3611
77.4
RHH5268_R3640
94.4
Memory CD4 T-cell Th17 nTPM: 107.0
Samples: 4
Max nTPM: 134.6
Min nTPM: 90.8
RHH5304_R3670
134.6
RHH5212_R3583
101.8
RHH5240_R3612
100.8
RHH5269_R3641
90.8
Memory CD4 T-cell Th2 nTPM: 117.2
Samples: 4
Max nTPM: 140.7
Min nTPM: 99.6
RHH5305_R3671
119.1
RHH5213_R3584
109.3
RHH5241_R3613
140.7
RHH5270_R3642
99.6
Naive CD4 T-cell nTPM: 109.1
Samples: 4
Max nTPM: 127.5
Min nTPM: 90.3
RHH5306_R3672
127.5
RHH5214_R3585
90.3
RHH5242_R3614
123.4
RHH5271_R3643
95.3
Naive CD8 T-cell nTPM: 105.2
Samples: 4
Max nTPM: 140.7
Min nTPM: 55.1
RHH5201_R3572
140.7
RHH5229_R3601
55.1
RHH5258_R3630
96.5
RHH5287_R3659
128.5
Non-Vd2 gdTCR nTPM: 123.3
Samples: 4
Max nTPM: 143.8
Min nTPM: 94.9
RHH5235_R3607
135.5
RHH5264_R3636
119.1
RHH5207_R3578
143.8
RHH5299_R3665
94.9
T-reg nTPM: 101.9
Samples: 4
Max nTPM: 120.0
Min nTPM: 90.9
RHH5301_R3667
99.6
RHH5237_R3609
120.0
RHH5266_R3638
90.9
RHH5209_R3580
97.0
Terminal effector memory CD4 T-cell nTPM: 113.0
Samples: 2
Max nTPM: 121.8
Min nTPM: 104.1
RHH5243_R3615
121.8
RHH5272_R3644
104.1
Terminal effector memory CD8 T-cell nTPM: 111.5
Samples: 4
Max nTPM: 126.8
Min nTPM: 97.8
RHH5232_R3604
126.8
RHH5204_R3575
113.9
RHH5261_R3633
97.8
RHH5296_R3662
107.4
Vd2 gdTCR nTPM: 127.1
Samples: 4
Max nTPM: 138.6
Min nTPM: 96.6
RHH5234_R3606
136.8
RHH5206_R3577
136.5
RHH5263_R3635
138.6
RHH5298_R3664
96.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
