HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.0 nTPM
HPA Brain:17.5 nTPM
GTEx:23.0 nTPM
FANTOM5:25.0 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:23.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027451Antibody HPA027794
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1898 Male, age 80, left hemisphere 18.0
1911 Female, age 85, right hemisphere 14.8
2148 Female, age 91, left hemisphere 14.2
2621 Female, age 67, right hemisphere 13.3
1855 Male, age 76, left hemisphere 11.6
2529 Female, age 94, left hemisphere 10.1
Dentate gyrus
nTPM: 12.9
1927 Female, age 91, both hemispheres 17.7
2531 Female, age 67, both hemispheres 13.5
2528 Male, age 74, both hemispheres 12.5
2246 Female, age 85, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.9
2530 Female, age 94, left hemisphere 9.9
Entorhinal gyrus
nTPM: 17.3
2613 Female, age 94, left hemisphere 26.8
1938 Female, age 85, left hemisphere 16.9
2686 Male, age 75, right hemisphere 16.4
1787 Male, age 76, left hemisphere 16.3
2764 Male, age 80, right hemisphere 15.7
2117 Female, age 91, right hemisphere 11.5
Hippocampus, CA1
nTPM: 15.1
2749 Male, age 80, left hemisphere 26.5
2527 Male, age 74, both hemispheres 14.1
2045 Male, age 76, both hemispheres 11.9
1873 Female, age 85, both hemispheres 11.7
2082 Female, age 91, right hemisphere 11.5
Hippocampus, CA2
nTPM: 14.5
1892 Male, age 76, both hemispheres 23.3
1963 Male, age 80, left hemisphere 16.2
1940 Female, age 85, left hemisphere 14.0
2249 Male, age 74, both hemispheres 11.8
2437 Female, age 94, left hemisphere 11.4
2113 Female, age 91, right hemisphere 10.5
Hippocampus, CA3
nTPM: 15.8
2137 Male, age 80, left hemisphere 23.0
1867 Male, age 76, both hemispheres 21.0
2620 Female, age 94, left hemisphere 14.5
1891 Female, age 85, both hemispheres 12.9
2861 Female, age 67, both hemispheres 12.6
2436 Male, age 74, both hemispheres 10.6
Parahippocampal cortex
nTPM: 14.8
2693 Female, age 94, both hemispheres 17.6
2622 Female, age 67, right hemisphere 16.4
1850 Male, age 80, both hemispheres 15.2
2692 Male, age 74, both hemispheres 15.1
2245 Female, age 91, both hemispheres 14.6
2250 Female, age 67, right hemisphere 14.5
2532 Female, age 72, left hemisphere 14.5
1990 Female, age 91, right hemisphere 13.7
1933 Female, age 85, both hemispheres 13.6
2018 Male, age 76, both hemispheres 12.6
Perirhinal gyrus
nTPM: 17.5
1847 Female, age 91, left hemisphere 19.7
1794 Male, age 80, right hemisphere 18.9
2521 Female, age 94, right hemisphere 18.8
2848 Male, age 76, right hemisphere 15.6
1841 Female, age 85, right hemisphere 14.5
Subiculum
nTPM: 14.3
1901 Male, age 80, both hemispheres 18.4
2042 Male, age 76, both hemispheres 18.1
2438 Female, age 94, left hemisphere 13.9
2619 Male, age 74, both hemispheres 13.4
1977 Female, age 85, both hemispheres 11.7
2729 Female, age 91, right hemisphere 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 54.9
Min nTPM: 5.9
Std nTPM: 8.8
Median nTPM: 22.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 54.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 46.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 43.4
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 43.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 42.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 42.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 42.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 40.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 39.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 38.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.0
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.3
Sample A Female 15.9
Sample B Female 12.2
Sample C Male 13.3
Sample D Male 10.3
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.6
Sample A Female 10.7
Sample B Female 12.7
Sample C Male 9.6
Sample D Male 14.2
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.7
Sample A Female 15.0
Sample B Female 11.7
Sample C Male 13.1
Sample D Male 15.2
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 12.6
Sample C Male 14.2
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 21.6
Min nTPM: 17.2
Sample A Male 19.9
Sample B Male 21.6
Sample C Female 18.0
Sample D Female 17.2
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.6
Sample A Male 21.6
Sample B Male 23.2
Sample C Female 24.2
Sample D Female 23.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68148754 Antisense, RP_041116_02_B07, Mouse strain C57BL/6J (56 days, male) 1.5

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