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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6333.9
nTPM
Monaco:
1854.1
nTPM
Schmiedel:
139.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6333.9
HPA sample
nTPM
gdT-cell nTPM: 4042.1
Samples: 6
Max nTPM: 5683.6
Min nTPM: 2670.3
P10809_1007
5683.6
P10809_1022
3706.5
P10809_1041
4910.6
P10809_1060
2670.3
P10809_1077
3660.3
P10809_1098
3621.4
MAIT T-cell nTPM: 5939.4
Samples: 6
Max nTPM: 6483.4
Min nTPM: 5535.6
P10809_1006
6468.3
P10809_1024
6483.4
P10809_1043
5541.1
P10809_1062
5632.2
P10809_1083
5535.6
P10809_1097
5975.9
Memory CD4 T-cell nTPM: 5806.8
Samples: 6
Max nTPM: 7558.3
Min nTPM: 4368.2
P10809_1014
7558.3
P10809_1026
7403.9
P10809_1045
5296.6
P10809_1064
4368.2
P10809_1086
4740.3
P10809_1113
5473.7
Memory CD8 T-cell nTPM: 5257.1
Samples: 5
Max nTPM: 6582.3
Min nTPM: 4238.4
P10809_1012
6582.3
P10809_1027
5948.3
P10809_1046
4995.4
P10809_1065
4521.1
P10809_1111
4238.4
Naive CD4 T-cell nTPM: 6333.9
Samples: 6
Max nTPM: 8896.1
Min nTPM: 3826.0
P10809_1015
8896.1
P10809_1030
8077.9
P10809_1049
3826.0
P10809_1068
6673.0
P10809_1085
5017.9
P10809_1112
5512.4
Naive CD8 T-cell nTPM: 5971.4
Samples: 6
Max nTPM: 10407.2
Min nTPM: 3738.1
P10809_1016
10407.2
P10809_1031
6487.1
P10809_1050
5102.6
P10809_1069
5302.6
P10809_1087
3738.1
P10809_1110
4791.0
T-reg nTPM: 4306.5
Samples: 6
Max nTPM: 4988.2
Min nTPM: 3021.9
P10809_1018
4694.6
P10809_1037
4735.3
P10809_1056
3021.9
P10809_1075
4438.2
P10809_1094
4988.2
P10809_1106
3960.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1854.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1270.0
Samples: 4
Max nTPM: 1785.9
Min nTPM: 712.8
RHH5202_R3573
712.8
RHH5230_R3602
1375.4
RHH5259_R3631
1785.9
RHH5288_R3660
1205.8
Effector memory CD8 T-cell nTPM: 697.7
Samples: 4
Max nTPM: 1212.3
Min nTPM: 483.3
RHH5203_R3574
483.3
RHH5231_R3603
539.1
RHH5260_R3632
1212.3
RHH5289_R3661
556.1
MAIT T-cell nTPM: 1091.0
Samples: 4
Max nTPM: 1287.4
Min nTPM: 744.8
RHH5233_R3605
744.8
RHH5205_R3576
1287.4
RHH5262_R3634
1192.7
RHH5297_R3663
1138.9
Memory CD4 T-cell TFH nTPM: 1063.7
Samples: 4
Max nTPM: 1626.8
Min nTPM: 779.0
RHH5300_R3666
950.4
RHH5236_R3608
1626.8
RHH5265_R3637
898.4
RHH5208_R3579
779.0
Memory CD4 T-cell Th1 nTPM: 1502.8
Samples: 4
Max nTPM: 2193.0
Min nTPM: 649.5
RHH5210_R3581
649.5
RHH5302_R3668
1559.2
RHH5238_R3610
2193.0
RHH5267_R3639
1609.3
Memory CD4 T-cell Th1/Th17 nTPM: 1449.8
Samples: 4
Max nTPM: 1893.8
Min nTPM: 854.6
RHH5303_R3669
1395.0
RHH5211_R3582
854.6
RHH5239_R3611
1655.9
RHH5268_R3640
1893.8
Memory CD4 T-cell Th17 nTPM: 1393.3
Samples: 4
Max nTPM: 1970.3
Min nTPM: 923.9
RHH5304_R3670
1970.3
RHH5212_R3583
923.9
RHH5240_R3612
1469.5
RHH5269_R3641
1209.6
Memory CD4 T-cell Th2 nTPM: 1369.1
Samples: 4
Max nTPM: 2107.9
Min nTPM: 1083.5
RHH5305_R3671
2107.9
RHH5213_R3584
1114.7
RHH5241_R3613
1083.5
RHH5270_R3642
1170.4
Naive CD4 T-cell nTPM: 1854.1
Samples: 4
Max nTPM: 2413.1
Min nTPM: 1193.5
RHH5306_R3672
2154.8
RHH5214_R3585
2413.1
RHH5242_R3614
1193.5
RHH5271_R3643
1655.1
Naive CD8 T-cell nTPM: 1590.7
Samples: 4
Max nTPM: 2311.5
Min nTPM: 931.5
RHH5201_R3572
931.5
RHH5229_R3601
2311.5
RHH5258_R3630
985.9
RHH5287_R3659
2134.0
Non-Vd2 gdTCR nTPM: 762.9
Samples: 4
Max nTPM: 888.8
Min nTPM: 668.9
RHH5235_R3607
888.8
RHH5264_R3636
733.4
RHH5207_R3578
668.9
RHH5299_R3665
760.5
T-reg nTPM: 1249.4
Samples: 4
Max nTPM: 1415.3
Min nTPM: 1050.6
RHH5301_R3667
1240.3
RHH5237_R3609
1050.6
RHH5266_R3638
1291.2
RHH5209_R3580
1415.3
Terminal effector memory CD4 T-cell nTPM: 809.2
Samples: 2
Max nTPM: 895.1
Min nTPM: 723.3
RHH5243_R3615
895.1
RHH5272_R3644
723.3
Terminal effector memory CD8 T-cell nTPM: 998.4
Samples: 4
Max nTPM: 1439.0
Min nTPM: 418.7
RHH5232_R3604
418.7
RHH5204_R3575
1359.3
RHH5261_R3633
1439.0
RHH5296_R3662
776.7
Vd2 gdTCR nTPM: 1671.5
Samples: 4
Max nTPM: 2558.3
Min nTPM: 929.4
RHH5234_R3606
929.4
RHH5206_R3577
2558.3
RHH5263_R3635
1746.9
RHH5298_R3664
1451.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.