We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
318.2
nTPM
FANTOM5:
307.3
Scaled Tags Per Million
Pig:
87.6
nTPM
Allen mouse:
11.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
318.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 94.3
2090
Male, age 80, both hemispheres
104.7
2301
Female, age 85, both hemispheres
100.9
2188
Female, age 91, both hemispheres
97.8
1984
Male, age 76, both hemispheres
73.7
Dorsal cochlear nucleus nTPM: 127.9
2187
Female, age 91, both hemispheres
177.4
2370
Male, age 61, both hemispheres
146.4
2058
Male, age 76, both hemispheres
135.1
2802
Male, age 74, right hemisphere
111.2
2378
Male, age 80, both hemispheres
69.4
Dorsal tegmental nucleus nTPM: 148.4
2083
Male, age 80, both hemispheres
201.1
1936
Male, age 76, left hemisphere
142.5
2358
Male, age 61, both hemispheres
127.2
2326
Male, age 74, both hemispheres
122.8
Dorsolateral tegmental area nTPM: 158.6
2141
Male, age 76, both hemispheres
238.4
2751
Female, age 85, both hemispheres
181.8
2654
Male, age 80, both hemispheres
181.1
2360
Male, age 74, both hemispheres
120.1
2337
Male, age 61, both hemispheres
71.3
Kolliker-Fuse nucleus nTPM: 119.9
2163
Male, age 80, both hemispheres
166.1
2793
Female, age 91, left hemisphere
107.4
2315
Male, age 76, right hemisphere
86.3
Lateral lemniscal nuclei nTPM: 137.9
2169
Male, age 76, both hemispheres
165.4
2453
Male, age 74, right hemisphere
158.8
2746
Female, age 85, left hemisphere
141.9
2036
Male, age 80, both hemispheres
126.2
2320
Female, age 91, left hemisphere
97.0
Lateral parabrachial nucleus nTPM: 128.8
2139
Female, age 85, right hemisphere
172.8
2790
Male, age 61, both hemispheres
147.9
2013
Male, age 80, both hemispheres
121.7
2792
Male, age 76, both hemispheres
72.7
Lateral vestibular nucleus nTPM: 134.0
2184
Male, age 76, both hemispheres
134.4
2311
Male, age 80, both hemispheres
133.7
Locus coeruleus nTPM: 318.2
2720
Male, age 74, both hemispheres
376.6
2014
Male, age 55, unknown
355.5
2123
Female, age 91, both hemispheres
343.9
2788
Male, age 74, unknown
343.2
2317
Female, age 72, unknown
272.7
2162
Male, age 80, both hemispheres
268.7
1980
Male, age 76, both hemispheres
267.0
Medial parabrachial nucleus nTPM: 166.4
2170
Female, age 91, both hemispheres
215.4
2786
Male, age 76, both hemispheres
179.5
2156
Male, age 61, both hemispheres
157.7
2854
Male, age 80, both hemispheres
153.2
2463
Female, age 85, right hemisphere
126.3
Medial periolivary nuclei nTPM: 127.8
2171
Female, age 85, both hemispheres
176.4
2063
Male, age 76, both hemispheres
163.0
2791
Male, age 74, right hemisphere
126.9
2458
Female, age 91, both hemispheres
89.6
2081
Male, age 80, both hemispheres
83.0
Motor facial nucleus nTPM: 135.8
2062
Male, age 76, both hemispheres
166.2
2365
Male, age 74, right hemisphere
145.1
2126
Male, age 61, both hemispheres
136.6
2697
Female, age 85, both hemispheres
135.4
2327
Male, age 80, both hemispheres
132.5
2795
Female, age 91, both hemispheres
98.8
Motor trigeminal nucleus nTPM: 140.4
2309
Male, age 76, both hemispheres
166.6
2335
Male, age 61, both hemispheres
165.8
2079
Male, age 80, both hemispheres
130.6
2560
Male, age 74, both hemispheres
125.2
2321
Female, age 91, both hemispheres
113.9
Nuclei of the trapezoid body nTPM: 140.9
2735
Female, age 85, both hemispheres
182.3
2159
Male, age 61, both hemispheres
163.0
1983
Male, age 76, both hemispheres
150.2
2166
Male, age 80, both hemispheres
113.2
2368
Female, age 91, both hemispheres
95.8
Nucleus raphe magnus nTPM: 148.0
2172
Female, age 85, both hemispheres
195.5
2455
Male, age 74, both hemispheres
185.3
2160
Male, age 61, both hemispheres
169.3
2328
Male, age 80, both hemispheres
122.9
2051
Male, age 76, both hemispheres
110.7
2459
Female, age 91, both hemispheres
104.0
Paramedian reticular nucleus nTPM: 185.9
2313
Male, age 61, both hemispheres
228.8
2050
Female, age 85, both hemispheres
213.6
2057
Male, age 80, both hemispheres
178.7
2052
Male, age 76, both hemispheres
122.5
Pedunculopontine tegmental nucleus nTPM: 196.3
1921
Female, age 85, both hemispheres
235.4
2334
Male, age 80, both hemispheres
219.8
2338
Male, age 61, both hemispheres
133.9
Pontine nuclei nTPM: 140.7
2787
Female, age 85, both hemispheres
209.6
1863
Male, age 55, unknown
171.2
2109
Female, age 72, unknown
146.2
2727
Male, age 61, right hemisphere
145.7
1968
Male, age 76, left hemisphere
141.2
2454
Male, age 74, left hemisphere
130.4
2115
Male, age 80, left hemisphere
90.6
2319
Female, age 91, both hemispheres
90.2
Pontine raphe nucleus nTPM: 260.1
2853
Male, age 76, midline
282.9
2122
Female, age 85, midline
237.3
Posteroventral cochlear nucleus nTPM: 125.4
2752
Female, age 85, both hemispheres
241.8
2070
Male, age 76, both hemispheres
174.5
2371
Male, age 61, both hemispheres
97.4
2135
Female, age 91, both hemispheres
58.4
2341
Male, age 80, both hemispheres
54.7
Principal sensory trigeminal nucleus nTPM: 128.7
2158
Male, age 61, both hemispheres
147.5
2008
Male, age 80, left hemisphere
142.8
2324
Male, age 76, both hemispheres
122.5
2367
Female, age 91, left hemisphere
102.1
Reticular pontine nucleus, caudal nTPM: 124.0
2559
Male, age 74, both hemispheres
134.1
2332
Male, age 80, right hemisphere
131.6
2092
Male, age 76, both hemispheres
130.3
2457
Female, age 91, both hemispheres
100.1
Reticular pontine nucleus, oral nTPM: 164.9
1939
Male, age 80, both hemispheres
186.9
2361
Male, age 74, both hemispheres
183.8
2167
Male, age 76, both hemispheres
183.2
2012
Female, age 85, both hemispheres
170.7
2366
Female, age 91, both hemispheres
100.2
Reticulotegmental nucleus nTPM: 156.4
2325
Male, age 76, both hemispheres
181.3
2452
Male, age 74, both hemispheres
156.1
2322
Female, age 91, both hemispheres
151.2
2333
Male, age 80, both hemispheres
137.0
Spinal trigeminal nucleus, oral nTPM: 156.8
2737
Female, age 85, both hemispheres
171.1
1978
Male, age 76, both hemispheres
164.7
2164
Male, age 80, both hemispheres
134.5
Subcoeruleus area nTPM: 188.5
2323
Female, age 91, left hemisphere
307.1
1958
Male, age 80, both hemispheres
198.1
2451
Male, age 74, both hemispheres
155.9
2369
Female, age 85, left hemisphere
146.5
2089
Male, age 76, left hemisphere
134.6
Superior olive nTPM: 135.0
1875
Female, age 85, both hemispheres
192.3
2020
Male, age 76, both hemispheres
137.6
2364
Male, age 74, right hemisphere
134.0
2329
Male, age 80, right hemisphere
111.7
2561
Female, age 91, both hemispheres
99.3
Ventral periolivary nuclei nTPM: 138.9
2130
Female, age 85, both hemispheres
173.7
2165
Male, age 80, both hemispheres
143.1
2023
Male, age 76, both hemispheres
130.5
2794
Female, age 91, left hemisphere
108.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 130.2
2449
Male, age 74, both hemispheres
165.2
2840
Female, age 85, both hemispheres
152.4
2359
Male, age 61, both hemispheres
147.8
1959
Male, age 76, both hemispheres
127.9
2161
Male, age 80, both hemispheres
109.1
2456
Female, age 91, both hemispheres
78.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
87.6
Pig sample
Sample description
nTPM
Pons nTPM: 87.6
Samples: 4
Max nTPM: 104.5
Min nTPM: 57.8
Sample A
Female
85.9
Sample B
Female
104.5
Sample C
Male
102.2
Sample D
Male
57.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
