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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.9
nTPM
Monaco:
251.3
nTPM
Schmiedel:
104.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.9
HPA sample
nTPM
gdT-cell nTPM: 31.2
Samples: 6
Max nTPM: 44.9
Min nTPM: 11.2
P10809_1007
22.2
P10809_1022
33.8
P10809_1041
31.5
P10809_1060
44.9
P10809_1077
43.3
P10809_1098
11.2
MAIT T-cell nTPM: 32.9
Samples: 6
Max nTPM: 49.9
Min nTPM: 16.3
P10809_1006
16.3
P10809_1024
23.7
P10809_1043
34.4
P10809_1062
49.3
P10809_1083
49.9
P10809_1097
23.8
Memory CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 38.5
Min nTPM: 18.0
P10809_1014
18.0
P10809_1026
22.4
P10809_1045
23.7
P10809_1064
38.5
P10809_1086
37.3
P10809_1113
21.2
Memory CD8 T-cell nTPM: 27.7
Samples: 5
Max nTPM: 42.2
Min nTPM: 16.7
P10809_1012
24.7
P10809_1027
28.2
P10809_1046
26.8
P10809_1065
42.2
P10809_1111
16.7
Naive CD4 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 40.0
Min nTPM: 20.9
P10809_1015
24.5
P10809_1030
20.9
P10809_1049
35.6
P10809_1068
40.0
P10809_1085
22.6
P10809_1112
21.3
Naive CD8 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 41.4
Min nTPM: 14.4
P10809_1016
20.4
P10809_1031
14.4
P10809_1050
18.3
P10809_1069
41.4
P10809_1087
32.5
P10809_1110
21.0
T-reg nTPM: 31.3
Samples: 6
Max nTPM: 68.4
Min nTPM: 17.7
P10809_1018
22.5
P10809_1037
17.7
P10809_1056
24.2
P10809_1075
68.4
P10809_1094
31.4
P10809_1106
23.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
251.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 207.0
Samples: 4
Max nTPM: 235.6
Min nTPM: 172.1
RHH5202_R3573
172.1
RHH5230_R3602
235.6
RHH5259_R3631
213.5
RHH5288_R3660
206.9
Effector memory CD8 T-cell nTPM: 173.1
Samples: 4
Max nTPM: 246.9
Min nTPM: 136.7
RHH5203_R3574
246.9
RHH5231_R3603
136.7
RHH5260_R3632
155.2
RHH5289_R3661
153.7
MAIT T-cell nTPM: 208.0
Samples: 4
Max nTPM: 254.5
Min nTPM: 182.9
RHH5233_R3605
197.7
RHH5205_R3576
254.5
RHH5262_R3634
196.8
RHH5297_R3663
182.9
Memory CD4 T-cell TFH nTPM: 196.4
Samples: 4
Max nTPM: 240.3
Min nTPM: 124.3
RHH5300_R3666
187.3
RHH5236_R3608
240.3
RHH5265_R3637
233.6
RHH5208_R3579
124.3
Memory CD4 T-cell Th1 nTPM: 208.3
Samples: 4
Max nTPM: 224.9
Min nTPM: 183.8
RHH5210_R3581
218.1
RHH5302_R3668
183.8
RHH5238_R3610
206.2
RHH5267_R3639
224.9
Memory CD4 T-cell Th1/Th17 nTPM: 183.6
Samples: 4
Max nTPM: 221.4
Min nTPM: 115.2
RHH5303_R3669
115.2
RHH5211_R3582
182.9
RHH5239_R3611
215.0
RHH5268_R3640
221.4
Memory CD4 T-cell Th17 nTPM: 193.2
Samples: 4
Max nTPM: 219.4
Min nTPM: 155.4
RHH5304_R3670
219.4
RHH5212_R3583
155.4
RHH5240_R3612
190.7
RHH5269_R3641
207.1
Memory CD4 T-cell Th2 nTPM: 177.3
Samples: 4
Max nTPM: 200.0
Min nTPM: 148.6
RHH5305_R3671
148.6
RHH5213_R3584
164.2
RHH5241_R3613
200.0
RHH5270_R3642
196.3
Naive CD4 T-cell nTPM: 196.7
Samples: 4
Max nTPM: 248.3
Min nTPM: 151.2
RHH5306_R3672
163.4
RHH5214_R3585
151.2
RHH5242_R3614
248.3
RHH5271_R3643
223.7
Naive CD8 T-cell nTPM: 165.9
Samples: 4
Max nTPM: 201.8
Min nTPM: 108.4
RHH5201_R3572
108.4
RHH5229_R3601
172.2
RHH5258_R3630
181.0
RHH5287_R3659
201.8
Non-Vd2 gdTCR nTPM: 202.6
Samples: 4
Max nTPM: 253.4
Min nTPM: 135.3
RHH5235_R3607
253.4
RHH5264_R3636
135.3
RHH5207_R3578
229.7
RHH5299_R3665
191.9
T-reg nTPM: 212.0
Samples: 4
Max nTPM: 229.6
Min nTPM: 175.5
RHH5301_R3667
175.5
RHH5237_R3609
229.6
RHH5266_R3638
223.2
RHH5209_R3580
219.6
Terminal effector memory CD4 T-cell nTPM: 251.3
Samples: 2
Max nTPM: 253.8
Min nTPM: 248.7
RHH5243_R3615
248.7
RHH5272_R3644
253.8
Terminal effector memory CD8 T-cell nTPM: 198.8
Samples: 4
Max nTPM: 252.9
Min nTPM: 142.8
RHH5232_R3604
252.9
RHH5204_R3575
215.0
RHH5261_R3633
184.3
RHH5296_R3662
142.8
Vd2 gdTCR nTPM: 175.5
Samples: 4
Max nTPM: 208.1
Min nTPM: 154.7
RHH5234_R3606
208.1
RHH5206_R3577
154.7
RHH5263_R3635
161.0
RHH5298_R3664
178.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
