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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.5
nTPM
Monaco:
10.3
nTPM
Schmiedel:
10.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.5
HPA sample
nTPM
gdT-cell nTPM: 47.1
Samples: 6
Max nTPM: 71.5
Min nTPM: 36.5
P10809_1007
71.5
P10809_1022
42.8
P10809_1041
46.9
P10809_1060
36.5
P10809_1077
42.7
P10809_1098
42.4
MAIT T-cell nTPM: 41.9
Samples: 6
Max nTPM: 63.2
Min nTPM: 27.2
P10809_1006
63.2
P10809_1024
27.4
P10809_1043
56.8
P10809_1062
27.2
P10809_1083
31.5
P10809_1097
45.0
Memory CD4 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 63.9
Min nTPM: 32.3
P10809_1014
51.3
P10809_1026
60.1
P10809_1045
63.9
P10809_1064
32.3
P10809_1086
45.3
P10809_1113
41.4
Memory CD8 T-cell nTPM: 80.3
Samples: 5
Max nTPM: 101.7
Min nTPM: 52.9
P10809_1012
101.7
P10809_1027
93.1
P10809_1046
78.6
P10809_1065
52.9
P10809_1111
75.4
Naive CD4 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 76.7
Min nTPM: 32.0
P10809_1015
60.3
P10809_1030
48.4
P10809_1049
76.7
P10809_1068
32.0
P10809_1085
35.6
P10809_1112
44.9
Naive CD8 T-cell nTPM: 85.8
Samples: 6
Max nTPM: 140.3
Min nTPM: 57.5
P10809_1016
140.3
P10809_1031
76.8
P10809_1050
106.8
P10809_1069
57.5
P10809_1087
59.2
P10809_1110
74.3
T-reg nTPM: 89.5
Samples: 6
Max nTPM: 122.6
Min nTPM: 43.6
P10809_1018
103.1
P10809_1037
119.8
P10809_1056
122.6
P10809_1075
43.6
P10809_1094
75.8
P10809_1106
72.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 5.7
Samples: 4
Max nTPM: 15.3
Min nTPM: 1.4
RHH5202_R3573
2.5
RHH5230_R3602
1.4
RHH5259_R3631
15.3
RHH5288_R3660
3.4
Effector memory CD8 T-cell nTPM: 4.7
Samples: 4
Max nTPM: 7.5
Min nTPM: 2.2
RHH5203_R3574
3.9
RHH5231_R3603
5.0
RHH5260_R3632
7.5
RHH5289_R3661
2.2
MAIT T-cell nTPM: 4.6
Samples: 4
Max nTPM: 7.1
Min nTPM: 3.3
RHH5233_R3605
7.1
RHH5205_R3576
3.3
RHH5262_R3634
4.2
RHH5297_R3663
3.8
Memory CD4 T-cell TFH nTPM: 6.6
Samples: 4
Max nTPM: 15.0
Min nTPM: 0.4
RHH5300_R3666
15.0
RHH5236_R3608
6.7
RHH5265_R3637
0.4
RHH5208_R3579
4.1
Memory CD4 T-cell Th1 nTPM: 6.7
Samples: 4
Max nTPM: 11.7
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
3.7
RHH5238_R3610
11.7
RHH5267_R3639
11.2
Memory CD4 T-cell Th1/Th17 nTPM: 4.0
Samples: 4
Max nTPM: 5.8
Min nTPM: 2.1
RHH5303_R3669
5.8
RHH5211_R3582
4.2
RHH5239_R3611
2.1
RHH5268_R3640
3.7
Memory CD4 T-cell Th17 nTPM: 2.8
Samples: 4
Max nTPM: 3.7
Min nTPM: 1.2
RHH5304_R3670
2.6
RHH5212_R3583
3.7
RHH5240_R3612
3.5
RHH5269_R3641
1.2
Memory CD4 T-cell Th2 nTPM: 3.3
Samples: 4
Max nTPM: 4.4
Min nTPM: 2.3
RHH5305_R3671
4.4
RHH5213_R3584
3.5
RHH5241_R3613
2.3
RHH5270_R3642
2.8
Naive CD4 T-cell nTPM: 3.2
Samples: 4
Max nTPM: 6.0
Min nTPM: 1.4
RHH5306_R3672
6.0
RHH5214_R3585
3.9
RHH5242_R3614
1.4
RHH5271_R3643
1.4
Naive CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 11.5
Min nTPM: 2.4
RHH5201_R3572
2.4
RHH5229_R3601
11.4
RHH5258_R3630
6.1
RHH5287_R3659
11.5
Non-Vd2 gdTCR nTPM: 4.5
Samples: 4
Max nTPM: 5.9
Min nTPM: 3.1
RHH5235_R3607
5.9
RHH5264_R3636
3.9
RHH5207_R3578
5.2
RHH5299_R3665
3.1
T-reg nTPM: 6.0
Samples: 4
Max nTPM: 9.3
Min nTPM: 3.5
RHH5301_R3667
9.3
RHH5237_R3609
3.5
RHH5266_R3638
6.1
RHH5209_R3580
4.9
Terminal effector memory CD4 T-cell nTPM: 3.7
Samples: 2
Max nTPM: 5.5
Min nTPM: 1.8
RHH5243_R3615
1.8
RHH5272_R3644
5.5
Terminal effector memory CD8 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 16.7
Min nTPM: 0.0
RHH5232_R3604
0.0
RHH5204_R3575
16.7
RHH5261_R3633
2.0
RHH5296_R3662
5.4
Vd2 gdTCR nTPM: 10.3
Samples: 4
Max nTPM: 22.8
Min nTPM: 0.7
RHH5234_R3606
0.7
RHH5206_R3577
22.8
RHH5263_R3635
7.1
RHH5298_R3664
10.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
