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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.5
nTPM
Monaco:
175.8
nTPM
Schmiedel:
150.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.5
HPA sample
nTPM
gdT-cell nTPM: 66.2
Samples: 6
Max nTPM: 94.5
Min nTPM: 51.3
P10809_1007
55.2
P10809_1022
94.5
P10809_1041
75.4
P10809_1060
51.3
P10809_1077
56.0
P10809_1098
65.0
MAIT T-cell nTPM: 88.5
Samples: 6
Max nTPM: 121.8
Min nTPM: 72.0
P10809_1006
72.0
P10809_1024
121.8
P10809_1043
75.0
P10809_1062
77.0
P10809_1083
82.2
P10809_1097
102.7
Memory CD4 T-cell nTPM: 72.9
Samples: 6
Max nTPM: 91.6
Min nTPM: 61.5
P10809_1014
67.6
P10809_1026
71.5
P10809_1045
91.6
P10809_1064
61.5
P10809_1086
72.3
P10809_1113
72.9
Memory CD8 T-cell nTPM: 80.3
Samples: 5
Max nTPM: 87.8
Min nTPM: 75.8
P10809_1012
79.6
P10809_1027
78.0
P10809_1046
87.8
P10809_1065
75.8
P10809_1111
80.2
Naive CD4 T-cell nTPM: 78.1
Samples: 6
Max nTPM: 83.9
Min nTPM: 72.7
P10809_1015
72.7
P10809_1030
77.6
P10809_1049
83.9
P10809_1068
82.0
P10809_1085
77.8
P10809_1112
74.5
Naive CD8 T-cell nTPM: 73.5
Samples: 6
Max nTPM: 78.6
Min nTPM: 70.8
P10809_1016
70.9
P10809_1031
72.7
P10809_1050
78.6
P10809_1069
71.5
P10809_1087
70.8
P10809_1110
76.2
T-reg nTPM: 92.5
Samples: 6
Max nTPM: 105.7
Min nTPM: 83.3
P10809_1018
89.7
P10809_1037
105.7
P10809_1056
83.3
P10809_1075
92.0
P10809_1094
92.8
P10809_1106
91.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 152.6
Samples: 4
Max nTPM: 175.7
Min nTPM: 140.6
RHH5202_R3573
151.6
RHH5230_R3602
175.7
RHH5259_R3631
142.5
RHH5288_R3660
140.6
Effector memory CD8 T-cell nTPM: 175.9
Samples: 4
Max nTPM: 186.5
Min nTPM: 165.2
RHH5203_R3574
186.5
RHH5231_R3603
173.6
RHH5260_R3632
165.2
RHH5289_R3661
178.1
MAIT T-cell nTPM: 151.1
Samples: 4
Max nTPM: 167.7
Min nTPM: 123.0
RHH5233_R3605
153.2
RHH5205_R3576
167.7
RHH5262_R3634
160.4
RHH5297_R3663
123.0
Memory CD4 T-cell TFH nTPM: 149.8
Samples: 4
Max nTPM: 184.0
Min nTPM: 110.7
RHH5300_R3666
110.7
RHH5236_R3608
160.4
RHH5265_R3637
144.1
RHH5208_R3579
184.0
Memory CD4 T-cell Th1 nTPM: 153.3
Samples: 4
Max nTPM: 172.8
Min nTPM: 130.3
RHH5210_R3581
172.8
RHH5302_R3668
130.3
RHH5238_R3610
151.2
RHH5267_R3639
158.7
Memory CD4 T-cell Th1/Th17 nTPM: 162.0
Samples: 4
Max nTPM: 195.2
Min nTPM: 136.5
RHH5303_R3669
170.8
RHH5211_R3582
195.2
RHH5239_R3611
136.5
RHH5268_R3640
145.5
Memory CD4 T-cell Th17 nTPM: 148.1
Samples: 4
Max nTPM: 188.9
Min nTPM: 128.9
RHH5304_R3670
143.6
RHH5212_R3583
130.9
RHH5240_R3612
188.9
RHH5269_R3641
128.9
Memory CD4 T-cell Th2 nTPM: 168.9
Samples: 4
Max nTPM: 188.0
Min nTPM: 144.5
RHH5305_R3671
144.5
RHH5213_R3584
178.2
RHH5241_R3613
188.0
RHH5270_R3642
164.8
Naive CD4 T-cell nTPM: 136.4
Samples: 4
Max nTPM: 158.3
Min nTPM: 109.2
RHH5306_R3672
144.6
RHH5214_R3585
133.4
RHH5242_R3614
109.2
RHH5271_R3643
158.3
Naive CD8 T-cell nTPM: 134.6
Samples: 4
Max nTPM: 198.1
Min nTPM: 91.6
RHH5201_R3572
198.1
RHH5229_R3601
91.6
RHH5258_R3630
118.7
RHH5287_R3659
129.8
Non-Vd2 gdTCR nTPM: 152.9
Samples: 4
Max nTPM: 177.8
Min nTPM: 122.7
RHH5235_R3607
177.8
RHH5264_R3636
136.7
RHH5207_R3578
174.2
RHH5299_R3665
122.7
T-reg nTPM: 141.5
Samples: 4
Max nTPM: 177.4
Min nTPM: 121.1
RHH5301_R3667
121.1
RHH5237_R3609
135.6
RHH5266_R3638
131.9
RHH5209_R3580
177.4
Terminal effector memory CD4 T-cell nTPM: 151.3
Samples: 2
Max nTPM: 159.6
Min nTPM: 143.0
RHH5243_R3615
143.0
RHH5272_R3644
159.6
Terminal effector memory CD8 T-cell nTPM: 146.6
Samples: 4
Max nTPM: 165.2
Min nTPM: 133.4
RHH5232_R3604
134.8
RHH5204_R3575
133.4
RHH5261_R3633
152.9
RHH5296_R3662
165.2
Vd2 gdTCR nTPM: 142.3
Samples: 4
Max nTPM: 165.0
Min nTPM: 117.7
RHH5234_R3606
165.0
RHH5206_R3577
117.7
RHH5263_R3635
159.9
RHH5298_R3664
126.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
