HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:34.2 nTPM
GTEx:39.8 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:6.5 nTPM
Mouse:6.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB026820
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2529 Female, age 94, left hemisphere 32.6
2621 Female, age 67, right hemisphere 31.8
1855 Male, age 76, left hemisphere 27.3
1911 Female, age 85, right hemisphere 26.0
2148 Female, age 91, left hemisphere 25.9
1898 Male, age 80, left hemisphere 22.8
Dentate gyrus
nTPM: 29.8
2530 Female, age 94, left hemisphere 48.4
2010 Male, age 76, both hemispheres 33.5
2531 Female, age 67, both hemispheres 32.9
2246 Female, age 85, both hemispheres 25.2
1927 Female, age 91, both hemispheres 19.7
2528 Male, age 74, both hemispheres 19.2
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 41.1
2686 Male, age 75, right hemisphere 39.5
2613 Female, age 94, left hemisphere 36.9
2764 Male, age 80, right hemisphere 36.7
1787 Male, age 76, left hemisphere 26.1
1938 Female, age 85, left hemisphere 25.1
Hippocampus, CA1
nTPM: 28.3
2045 Male, age 76, both hemispheres 34.6
2082 Female, age 91, right hemisphere 34.6
2749 Male, age 80, left hemisphere 31.8
2527 Male, age 74, both hemispheres 22.6
1873 Female, age 85, both hemispheres 17.8
Hippocampus, CA2
nTPM: 28.4
1963 Male, age 80, left hemisphere 32.7
2113 Female, age 91, right hemisphere 30.9
2437 Female, age 94, left hemisphere 29.0
1940 Female, age 85, left hemisphere 28.3
1892 Male, age 76, both hemispheres 25.7
2249 Male, age 74, both hemispheres 23.8
Hippocampus, CA3
nTPM: 30.1
1867 Male, age 76, both hemispheres 38.5
2436 Male, age 74, both hemispheres 33.6
2137 Male, age 80, left hemisphere 30.9
1891 Female, age 85, both hemispheres 28.6
2861 Female, age 67, both hemispheres 28.0
2620 Female, age 94, left hemisphere 21.0
Parahippocampal cortex
nTPM: 30.7
2532 Female, age 72, left hemisphere 42.8
2018 Male, age 76, both hemispheres 39.6
1990 Female, age 91, right hemisphere 34.2
2622 Female, age 67, right hemisphere 33.7
2245 Female, age 91, both hemispheres 31.7
2692 Male, age 74, both hemispheres 29.8
1933 Female, age 85, both hemispheres 28.8
1850 Male, age 80, both hemispheres 23.3
2693 Female, age 94, both hemispheres 23.3
2250 Female, age 67, right hemisphere 19.5
Perirhinal gyrus
nTPM: 25.0
1847 Female, age 91, left hemisphere 29.8
1841 Female, age 85, right hemisphere 25.8
1794 Male, age 80, right hemisphere 24.6
2521 Female, age 94, right hemisphere 24.0
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 33.0
1901 Male, age 80, both hemispheres 41.3
2042 Male, age 76, both hemispheres 40.9
1977 Female, age 85, both hemispheres 35.6
2438 Female, age 94, left hemisphere 31.2
2729 Female, age 91, right hemisphere 25.4
2619 Male, age 74, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 148.1
Min nTPM: 10.5
Std nTPM: 21.7
Median nTPM: 34.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 148.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 130.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 110.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 106.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 98.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 92.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 87.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 85.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 84.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 84.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 83.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 16.9
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.5
Pig sample Sample description nTPM
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 7.4
Min nTPM: 4.5
Sample A Female 7.4
Sample B Female 5.4
Sample C Male 6.1
Sample D Male 4.5
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 9.6
Min nTPM: 3.2
Sample A Female 7.4
Sample B Female 5.9
Sample C Male 9.6
Sample D Male 3.2
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.9
Sample A Female 5.0
Sample B Female 5.2
Sample C Male 5.7
Sample D Male 3.9
Ventral hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 8.3
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 5.6
Sample C Male 8.3
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 5.4
Min nTPM: 5.1
Sample A Male 5.2
Sample B Male 5.1
Sample C Female 5.1
Sample D Female 5.4
Hippocampal formation
nTPM: 6.9
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 6.7
Sample C Female 7.9
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79544896 Antisense, RP_071018_01_D02, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org