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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.0
nTPM
Monaco:
154.7
nTPM
Schmiedel:
81.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.0
HPA sample
nTPM
gdT-cell nTPM: 79.3
Samples: 6
Max nTPM: 111.3
Min nTPM: 51.0
P10809_1007
51.0
P10809_1022
111.3
P10809_1041
103.7
P10809_1060
69.6
P10809_1077
60.5
P10809_1098
79.5
MAIT T-cell nTPM: 86.1
Samples: 6
Max nTPM: 136.1
Min nTPM: 50.8
P10809_1006
50.8
P10809_1024
136.1
P10809_1043
96.4
P10809_1062
79.6
P10809_1083
71.4
P10809_1097
82.3
Memory CD4 T-cell nTPM: 72.4
Samples: 6
Max nTPM: 82.1
Min nTPM: 56.3
P10809_1014
56.3
P10809_1026
79.9
P10809_1045
82.1
P10809_1064
69.2
P10809_1086
79.6
P10809_1113
67.3
Memory CD8 T-cell nTPM: 92.0
Samples: 5
Max nTPM: 106.3
Min nTPM: 54.4
P10809_1012
54.4
P10809_1027
106.3
P10809_1046
97.2
P10809_1065
103.6
P10809_1111
98.3
Naive CD4 T-cell nTPM: 64.1
Samples: 6
Max nTPM: 97.9
Min nTPM: 43.3
P10809_1015
43.3
P10809_1030
63.8
P10809_1049
97.9
P10809_1068
61.5
P10809_1085
59.0
P10809_1112
58.8
Naive CD8 T-cell nTPM: 78.5
Samples: 6
Max nTPM: 107.6
Min nTPM: 47.2
P10809_1016
47.2
P10809_1031
107.6
P10809_1050
73.1
P10809_1069
88.6
P10809_1087
81.3
P10809_1110
73.1
T-reg nTPM: 79.4
Samples: 6
Max nTPM: 98.8
Min nTPM: 56.7
P10809_1018
67.0
P10809_1037
74.8
P10809_1056
98.8
P10809_1075
56.7
P10809_1094
89.7
P10809_1106
89.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 91.2
Samples: 4
Max nTPM: 112.9
Min nTPM: 62.3
RHH5202_R3573
100.5
RHH5230_R3602
89.1
RHH5259_R3631
62.3
RHH5288_R3660
112.9
Effector memory CD8 T-cell nTPM: 154.7
Samples: 4
Max nTPM: 198.7
Min nTPM: 128.9
RHH5203_R3574
147.1
RHH5231_R3603
144.0
RHH5260_R3632
128.9
RHH5289_R3661
198.7
MAIT T-cell nTPM: 116.3
Samples: 4
Max nTPM: 153.1
Min nTPM: 90.6
RHH5233_R3605
109.9
RHH5205_R3576
153.1
RHH5262_R3634
111.5
RHH5297_R3663
90.6
Memory CD4 T-cell TFH nTPM: 95.0
Samples: 4
Max nTPM: 112.3
Min nTPM: 75.1
RHH5300_R3666
75.1
RHH5236_R3608
112.3
RHH5265_R3637
101.0
RHH5208_R3579
91.7
Memory CD4 T-cell Th1 nTPM: 83.0
Samples: 4
Max nTPM: 107.0
Min nTPM: 66.2
RHH5210_R3581
76.1
RHH5302_R3668
82.8
RHH5238_R3610
66.2
RHH5267_R3639
107.0
Memory CD4 T-cell Th1/Th17 nTPM: 107.5
Samples: 4
Max nTPM: 130.7
Min nTPM: 82.5
RHH5303_R3669
109.7
RHH5211_R3582
130.7
RHH5239_R3611
82.5
RHH5268_R3640
107.0
Memory CD4 T-cell Th17 nTPM: 98.9
Samples: 4
Max nTPM: 105.3
Min nTPM: 93.7
RHH5304_R3670
100.5
RHH5212_R3583
95.9
RHH5240_R3612
105.3
RHH5269_R3641
93.7
Memory CD4 T-cell Th2 nTPM: 100.6
Samples: 4
Max nTPM: 107.3
Min nTPM: 88.1
RHH5305_R3671
107.3
RHH5213_R3584
104.9
RHH5241_R3613
102.0
RHH5270_R3642
88.1
Naive CD4 T-cell nTPM: 81.7
Samples: 4
Max nTPM: 89.4
Min nTPM: 75.8
RHH5306_R3672
75.9
RHH5214_R3585
89.4
RHH5242_R3614
75.8
RHH5271_R3643
85.7
Naive CD8 T-cell nTPM: 83.0
Samples: 4
Max nTPM: 97.4
Min nTPM: 60.0
RHH5201_R3572
88.8
RHH5229_R3601
60.0
RHH5258_R3630
85.9
RHH5287_R3659
97.4
Non-Vd2 gdTCR nTPM: 120.3
Samples: 4
Max nTPM: 147.3
Min nTPM: 87.9
RHH5235_R3607
109.8
RHH5264_R3636
147.3
RHH5207_R3578
136.3
RHH5299_R3665
87.9
T-reg nTPM: 97.4
Samples: 4
Max nTPM: 123.3
Min nTPM: 66.8
RHH5301_R3667
66.8
RHH5237_R3609
123.3
RHH5266_R3638
92.9
RHH5209_R3580
106.6
Terminal effector memory CD4 T-cell nTPM: 124.7
Samples: 2
Max nTPM: 136.6
Min nTPM: 112.7
RHH5243_R3615
112.7
RHH5272_R3644
136.6
Terminal effector memory CD8 T-cell nTPM: 120.0
Samples: 4
Max nTPM: 137.0
Min nTPM: 99.6
RHH5232_R3604
132.5
RHH5204_R3575
110.9
RHH5261_R3633
137.0
RHH5296_R3662
99.6
Vd2 gdTCR nTPM: 108.0
Samples: 4
Max nTPM: 139.5
Min nTPM: 77.3
RHH5234_R3606
93.0
RHH5206_R3577
139.5
RHH5263_R3635
122.3
RHH5298_R3664
77.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
