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BAZ1A
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  • BAZ1A
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BAZ1A
Synonyms ACF1, hACF1, WALp1, WCRF180
Gene descriptioni

Full gene name according to HGNC.

Bromodomain adjacent to zinc finger domain 1A
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband
Chromosome location (bp) 34752731 - 34875647
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000198604 (version 109)
Entrez gene 11177
HGNC HGNC:960
UniProt Q9NRL2 (UniProt - Evidence at protein level)
neXtProt NX_Q9NRL2
GeneCards BAZ1A
Antibodypedia BAZ1A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Regulatory subunit of the ATP-dependent ACF-1 and ACF-5 ISWI chromatin remodeling complexes, which form ordered nucleosome arrays on chromatin and slide edge- and center-positioned histone octamers away from their original location on the DNA template to facilitate access to DNA during DNA-templated processes such as DNA replication, transcription, and repair 1, 2. Both complexes regulate the spacing of nucleosomes along the chromatin and have the ability to slide mononucleosomes to the center of a DNA template in an ATP-dependent manner 3, 4, 5. The ACF-1 ISWI chromatin remodeling complex has a lower ATP hydrolysis rate than the ACF-5 ISWI chromatin remodeling complex 6. Has a role in sensing the length of DNA which flank nucleosomes, which modulates the nucleosome spacing activity of the ACF-5 ISWI chromatin remodeling complex 7. Involved in DNA replication and together with SMARCA5/SNF2H is required for replication of pericentric heterochromatin in S-phase 8. May have a role in nuclear receptor-mediated transcription repression 9.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

The BAZ1A gene encodes the accessory subunit of the ATP-dependent chromatin assembly factor (ACF), a member of the ISWI ('imitation switch') family of chromatin remodeling complexes (summarized by Racki et al., 2009).[supplied by OMIM, Apr 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BAZ1A-201
ENSP00000351555
ENST00000358716
Q9NRL2
[Direct mapping] Bromodomain adjacent to zinc finger domain protein 1A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005721 [pericentric heterochromatin]
GO:0006261 [DNA-templated DNA replication]
GO:0006275 [regulation of DNA replication]
GO:0006334 [nucleosome assembly]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008623 [CHRAC]
GO:0010604 [positive regulation of macromolecule metabolic process]
GO:0016590 [ACF complex]
GO:0031445 [regulation of heterochromatin formation]
GO:0045740 [positive regulation of DNA replication]
GO:0045935 [positive regulation of nucleobase-containing compound metabolic process]
GO:0046872 [metal ion binding]
Show all
1524 aa
175.4 kDa
No 0
BAZ1A-202
ENSP00000353458
ENST00000360310
Q9NRL2
[Direct mapping] Bromodomain adjacent to zinc finger domain protein 1A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005721 [pericentric heterochromatin]
GO:0006261 [DNA-templated DNA replication]
GO:0006275 [regulation of DNA replication]
GO:0006334 [nucleosome assembly]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008623 [CHRAC]
GO:0010604 [positive regulation of macromolecule metabolic process]
GO:0016590 [ACF complex]
GO:0031445 [regulation of heterochromatin formation]
GO:0045740 [positive regulation of DNA replication]
GO:0045935 [positive regulation of nucleobase-containing compound metabolic process]
GO:0046872 [metal ion binding]
Show all
1556 aa
178.7 kDa
No 0
BAZ1A-203
ENSP00000371859
ENST00000382422
Q9NRL2
[Direct mapping] Bromodomain adjacent to zinc finger domain protein 1A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000228 [nuclear chromosome]
GO:0000785 [chromatin]
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005721 [pericentric heterochromatin]
GO:0006261 [DNA-templated DNA replication]
GO:0006275 [regulation of DNA replication]
GO:0006334 [nucleosome assembly]
GO:0006338 [chromatin remodeling]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0008623 [CHRAC]
GO:0010604 [positive regulation of macromolecule metabolic process]
GO:0016590 [ACF complex]
GO:0031445 [regulation of heterochromatin formation]
GO:0045740 [positive regulation of DNA replication]
GO:0045935 [positive regulation of nucleobase-containing compound metabolic process]
GO:0046872 [metal ion binding]
Show all
1556 aa
178.7 kDa
No 0
BAZ1A-211
ENSP00000480380
ENST00000556314
A0A087WWN7
[Direct mapping] Bromodomain adjacent to zinc finger domain protein 1A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0043229 [intracellular organelle]
Show all
218 aa
25 kDa
No 0

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