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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.0
nTPM
Monaco:
139.6
nTPM
Schmiedel:
55.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.0
HPA sample
nTPM
gdT-cell nTPM: 57.3
Samples: 6
Max nTPM: 70.7
Min nTPM: 37.1
P10809_1007
37.1
P10809_1022
60.9
P10809_1041
53.4
P10809_1060
57.9
P10809_1077
70.7
P10809_1098
63.6
MAIT T-cell nTPM: 71.1
Samples: 6
Max nTPM: 96.0
Min nTPM: 46.2
P10809_1006
46.2
P10809_1024
96.0
P10809_1043
54.3
P10809_1062
72.9
P10809_1083
72.3
P10809_1097
84.6
Memory CD4 T-cell nTPM: 60.6
Samples: 6
Max nTPM: 76.2
Min nTPM: 49.0
P10809_1014
49.0
P10809_1026
62.3
P10809_1045
55.5
P10809_1064
57.7
P10809_1086
76.2
P10809_1113
62.9
Memory CD8 T-cell nTPM: 65.8
Samples: 5
Max nTPM: 81.1
Min nTPM: 52.5
P10809_1012
55.6
P10809_1027
67.2
P10809_1046
52.5
P10809_1065
72.6
P10809_1111
81.1
Naive CD4 T-cell nTPM: 58.4
Samples: 6
Max nTPM: 69.9
Min nTPM: 46.1
P10809_1015
46.1
P10809_1030
69.9
P10809_1049
68.3
P10809_1068
52.3
P10809_1085
58.2
P10809_1112
55.8
Naive CD8 T-cell nTPM: 60.9
Samples: 6
Max nTPM: 80.8
Min nTPM: 43.3
P10809_1016
43.3
P10809_1031
56.0
P10809_1050
51.0
P10809_1069
80.8
P10809_1087
75.4
P10809_1110
58.6
T-reg nTPM: 70.9
Samples: 6
Max nTPM: 87.1
Min nTPM: 59.0
P10809_1018
59.0
P10809_1037
83.7
P10809_1056
65.3
P10809_1075
66.9
P10809_1094
63.4
P10809_1106
87.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.6
Samples: 4
Max nTPM: 146.4
Min nTPM: 74.8
RHH5202_R3573
146.4
RHH5230_R3602
74.8
RHH5259_R3631
82.0
RHH5288_R3660
79.0
Effector memory CD8 T-cell nTPM: 139.6
Samples: 4
Max nTPM: 146.9
Min nTPM: 121.5
RHH5203_R3574
146.9
RHH5231_R3603
146.4
RHH5260_R3632
121.5
RHH5289_R3661
143.7
MAIT T-cell nTPM: 139.6
Samples: 4
Max nTPM: 163.6
Min nTPM: 128.6
RHH5233_R3605
131.0
RHH5205_R3576
163.6
RHH5262_R3634
135.2
RHH5297_R3663
128.6
Memory CD4 T-cell TFH nTPM: 98.0
Samples: 4
Max nTPM: 111.7
Min nTPM: 82.5
RHH5300_R3666
88.0
RHH5236_R3608
109.8
RHH5265_R3637
82.5
RHH5208_R3579
111.7
Memory CD4 T-cell Th1 nTPM: 81.9
Samples: 4
Max nTPM: 100.1
Min nTPM: 57.6
RHH5210_R3581
100.1
RHH5302_R3668
99.0
RHH5238_R3610
57.6
RHH5267_R3639
70.9
Memory CD4 T-cell Th1/Th17 nTPM: 115.7
Samples: 4
Max nTPM: 151.9
Min nTPM: 66.9
RHH5303_R3669
139.5
RHH5211_R3582
151.9
RHH5239_R3611
66.9
RHH5268_R3640
104.3
Memory CD4 T-cell Th17 nTPM: 120.2
Samples: 4
Max nTPM: 135.7
Min nTPM: 106.9
RHH5304_R3670
106.9
RHH5212_R3583
135.7
RHH5240_R3612
107.2
RHH5269_R3641
131.0
Memory CD4 T-cell Th2 nTPM: 110.0
Samples: 4
Max nTPM: 149.4
Min nTPM: 90.4
RHH5305_R3671
98.7
RHH5213_R3584
149.4
RHH5241_R3613
90.4
RHH5270_R3642
101.3
Naive CD4 T-cell nTPM: 88.3
Samples: 4
Max nTPM: 102.7
Min nTPM: 57.5
RHH5306_R3672
102.7
RHH5214_R3585
97.8
RHH5242_R3614
57.5
RHH5271_R3643
95.3
Naive CD8 T-cell nTPM: 87.7
Samples: 4
Max nTPM: 136.0
Min nTPM: 53.9
RHH5201_R3572
136.0
RHH5229_R3601
53.9
RHH5258_R3630
82.9
RHH5287_R3659
77.8
Non-Vd2 gdTCR nTPM: 127.9
Samples: 4
Max nTPM: 151.6
Min nTPM: 88.7
RHH5235_R3607
122.0
RHH5264_R3636
151.6
RHH5207_R3578
149.4
RHH5299_R3665
88.7
T-reg nTPM: 81.5
Samples: 4
Max nTPM: 88.7
Min nTPM: 75.5
RHH5301_R3667
85.2
RHH5237_R3609
75.5
RHH5266_R3638
76.6
RHH5209_R3580
88.7
Terminal effector memory CD4 T-cell nTPM: 122.7
Samples: 2
Max nTPM: 128.4
Min nTPM: 116.9
RHH5243_R3615
116.9
RHH5272_R3644
128.4
Terminal effector memory CD8 T-cell nTPM: 120.5
Samples: 4
Max nTPM: 128.3
Min nTPM: 108.7
RHH5232_R3604
128.3
RHH5204_R3575
117.0
RHH5261_R3633
108.7
RHH5296_R3662
128.1
Vd2 gdTCR nTPM: 128.4
Samples: 4
Max nTPM: 158.2
Min nTPM: 94.2
RHH5234_R3606
118.8
RHH5206_R3577
158.2
RHH5263_R3635
142.4
RHH5298_R3664
94.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
