HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.3 nTPM
HPA Brain:61.3 nTPM
GTEx:20.3 nTPM
FANTOM5:131.7 Scaled Tags Per Million
Pig:35.1 nTPM
Mouse:88.8 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012548
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.3
Sample id Sample description nTPM
Hippocampus
nTPM: 56.6
1898 Male, age 80, left hemisphere 64.2
1855 Male, age 76, left hemisphere 63.2
2621 Female, age 67, right hemisphere 55.7
2529 Female, age 94, left hemisphere 54.1
1911 Female, age 85, right hemisphere 51.5
2148 Female, age 91, left hemisphere 50.8
Dentate gyrus
nTPM: 53.4
2010 Male, age 76, both hemispheres 61.0
2246 Female, age 85, both hemispheres 55.5
2528 Male, age 74, both hemispheres 53.7
2530 Female, age 94, left hemisphere 53.1
1927 Female, age 91, both hemispheres 49.6
2531 Female, age 67, both hemispheres 47.2
Entorhinal gyrus
nTPM: 56.0
1938 Female, age 85, left hemisphere 61.5
2764 Male, age 80, right hemisphere 61.0
2117 Female, age 91, right hemisphere 58.9
1787 Male, age 76, left hemisphere 55.6
2686 Male, age 75, right hemisphere 50.4
2613 Female, age 94, left hemisphere 48.5
Hippocampus, CA1
nTPM: 57.0
2749 Male, age 80, left hemisphere 64.6
2045 Male, age 76, both hemispheres 58.7
1873 Female, age 85, both hemispheres 57.4
2527 Male, age 74, both hemispheres 53.6
2082 Female, age 91, right hemisphere 50.6
Hippocampus, CA2
nTPM: 53.8
1963 Male, age 80, left hemisphere 58.0
1892 Male, age 76, both hemispheres 57.8
1940 Female, age 85, left hemisphere 53.9
2249 Male, age 74, both hemispheres 52.9
2437 Female, age 94, left hemisphere 51.2
2113 Female, age 91, right hemisphere 49.3
Hippocampus, CA3
nTPM: 53.2
1867 Male, age 76, both hemispheres 57.1
2137 Male, age 80, left hemisphere 55.3
1891 Female, age 85, both hemispheres 54.4
2436 Male, age 74, both hemispheres 53.6
2620 Female, age 94, left hemisphere 50.8
2861 Female, age 67, both hemispheres 48.0
Parahippocampal cortex
nTPM: 54.9
1850 Male, age 80, both hemispheres 65.9
1933 Female, age 85, both hemispheres 61.0
2018 Male, age 76, both hemispheres 56.2
2532 Female, age 72, left hemisphere 54.5
2692 Male, age 74, both hemispheres 53.6
2245 Female, age 91, both hemispheres 53.2
1990 Female, age 91, right hemisphere 52.7
2622 Female, age 67, right hemisphere 50.7
2250 Female, age 67, right hemisphere 50.6
2693 Female, age 94, both hemispheres 50.4
Perirhinal gyrus
nTPM: 61.3
1794 Male, age 80, right hemisphere 69.7
1847 Female, age 91, left hemisphere 65.7
1841 Female, age 85, right hemisphere 62.3
2848 Male, age 76, right hemisphere 55.5
2521 Female, age 94, right hemisphere 53.3
Subiculum
nTPM: 55.5
1977 Female, age 85, both hemispheres 56.8
2438 Female, age 94, left hemisphere 56.3
2619 Male, age 74, both hemispheres 56.1
2042 Male, age 76, both hemispheres 56.0
1901 Male, age 80, both hemispheres 55.2
2729 Female, age 91, right hemisphere 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 26.8
Min nTPM: 13.6
Std nTPM: 2.4
Median nTPM: 20.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 25.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 25.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 24.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 24.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.7
FF:10169-103B7 60 years, female 173.4
FF:10153-102I9 76 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.1
Pig sample Sample description nTPM
Subiculum
nTPM: 33.0
Samples: 4

Max nTPM: 35.1
Min nTPM: 29.6
Sample A Female 35.1
Sample B Female 29.6
Sample C Male 32.0
Sample D Male 35.1
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 40.8
Min nTPM: 28.4
Sample A Female 40.8
Sample B Female 34.4
Sample C Male 28.4
Sample D Male 36.0
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 37.9
Min nTPM: 29.7
Sample A Female 37.9
Sample B Female 29.7
Sample C Male 32.3
Sample D Male 37.4
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.7
Sample A Female 36.9
Sample B Female 29.7
Sample C Male 33.3
Sample D Male 40.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.8
Samples: 4

Max nTPM: 87.2
Min nTPM: 79.5
Sample A Male 81.7
Sample B Male 86.7
Sample C Female 87.2
Sample D Female 79.5
Hippocampal formation
nTPM: 88.8
Samples: 4

Max nTPM: 100.1
Min nTPM: 82.5
Sample A Male 100.1
Sample B Male 85.1
Sample C Female 87.6
Sample D Female 82.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
70430842 Antisense, RP_050614_02_B11, Mouse strain C57BL/6J (56 days, male) 3.6

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