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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1036.7
nTPM
Monaco:
1416.2
nTPM
Schmiedel:
506.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1036.7
HPA sample
nTPM
gdT-cell nTPM: 881.1
Samples: 6
Max nTPM: 996.4
Min nTPM: 736.9
P10809_1007
996.4
P10809_1022
935.2
P10809_1041
877.1
P10809_1060
757.1
P10809_1077
983.9
P10809_1098
736.9
MAIT T-cell nTPM: 1036.7
Samples: 6
Max nTPM: 1273.9
Min nTPM: 792.1
P10809_1006
887.1
P10809_1024
1221.1
P10809_1043
792.1
P10809_1062
1008.5
P10809_1083
1273.9
P10809_1097
1037.7
Memory CD4 T-cell nTPM: 887.2
Samples: 6
Max nTPM: 1043.6
Min nTPM: 711.2
P10809_1014
806.0
P10809_1026
871.9
P10809_1045
943.5
P10809_1064
946.7
P10809_1086
1043.6
P10809_1113
711.2
Memory CD8 T-cell nTPM: 930.5
Samples: 5
Max nTPM: 1121.4
Min nTPM: 729.8
P10809_1012
729.8
P10809_1027
1121.4
P10809_1046
972.6
P10809_1065
1012.5
P10809_1111
816.0
Naive CD4 T-cell nTPM: 615.5
Samples: 6
Max nTPM: 730.8
Min nTPM: 433.0
P10809_1015
596.0
P10809_1030
677.5
P10809_1049
730.8
P10809_1068
581.8
P10809_1085
673.9
P10809_1112
433.0
Naive CD8 T-cell nTPM: 751.1
Samples: 6
Max nTPM: 1041.8
Min nTPM: 499.7
P10809_1016
572.3
P10809_1031
736.6
P10809_1050
796.8
P10809_1069
859.3
P10809_1087
1041.8
P10809_1110
499.7
T-reg nTPM: 973.5
Samples: 6
Max nTPM: 1202.4
Min nTPM: 756.4
P10809_1018
756.4
P10809_1037
1202.4
P10809_1056
952.8
P10809_1075
1087.5
P10809_1094
908.6
P10809_1106
933.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1416.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 887.5
Samples: 4
Max nTPM: 977.4
Min nTPM: 776.8
RHH5202_R3573
977.4
RHH5230_R3602
897.1
RHH5259_R3631
776.8
RHH5288_R3660
898.6
Effector memory CD8 T-cell nTPM: 1209.2
Samples: 4
Max nTPM: 1342.3
Min nTPM: 1023.9
RHH5203_R3574
1258.7
RHH5231_R3603
1211.9
RHH5260_R3632
1023.9
RHH5289_R3661
1342.3
MAIT T-cell nTPM: 1218.6
Samples: 4
Max nTPM: 1290.9
Min nTPM: 1119.5
RHH5233_R3605
1260.4
RHH5205_R3576
1290.9
RHH5262_R3634
1203.5
RHH5297_R3663
1119.5
Memory CD4 T-cell TFH nTPM: 980.8
Samples: 4
Max nTPM: 1256.5
Min nTPM: 758.1
RHH5300_R3666
758.1
RHH5236_R3608
1256.5
RHH5265_R3637
954.2
RHH5208_R3579
954.5
Memory CD4 T-cell Th1 nTPM: 892.0
Samples: 4
Max nTPM: 982.3
Min nTPM: 833.2
RHH5210_R3581
833.2
RHH5302_R3668
982.3
RHH5238_R3610
879.8
RHH5267_R3639
872.6
Memory CD4 T-cell Th1/Th17 nTPM: 1092.0
Samples: 4
Max nTPM: 1286.0
Min nTPM: 842.1
RHH5303_R3669
1281.3
RHH5211_R3582
1286.0
RHH5239_R3611
842.1
RHH5268_R3640
958.4
Memory CD4 T-cell Th17 nTPM: 1086.4
Samples: 4
Max nTPM: 1197.9
Min nTPM: 835.0
RHH5304_R3670
1197.9
RHH5212_R3583
1178.5
RHH5240_R3612
1134.2
RHH5269_R3641
835.0
Memory CD4 T-cell Th2 nTPM: 965.5
Samples: 4
Max nTPM: 1111.3
Min nTPM: 822.4
RHH5305_R3671
908.0
RHH5213_R3584
1020.2
RHH5241_R3613
1111.3
RHH5270_R3642
822.4
Naive CD4 T-cell nTPM: 744.2
Samples: 4
Max nTPM: 867.1
Min nTPM: 689.5
RHH5306_R3672
689.5
RHH5214_R3585
867.1
RHH5242_R3614
721.0
RHH5271_R3643
699.2
Naive CD8 T-cell nTPM: 714.4
Samples: 4
Max nTPM: 851.3
Min nTPM: 544.8
RHH5201_R3572
851.3
RHH5229_R3601
544.8
RHH5258_R3630
768.1
RHH5287_R3659
693.3
Non-Vd2 gdTCR nTPM: 1278.3
Samples: 4
Max nTPM: 1422.4
Min nTPM: 1125.8
RHH5235_R3607
1125.8
RHH5264_R3636
1360.2
RHH5207_R3578
1422.4
RHH5299_R3665
1204.8
T-reg nTPM: 891.3
Samples: 4
Max nTPM: 1118.5
Min nTPM: 780.7
RHH5301_R3667
803.6
RHH5237_R3609
1118.5
RHH5266_R3638
780.7
RHH5209_R3580
862.5
Terminal effector memory CD4 T-cell nTPM: 1209.9
Samples: 2
Max nTPM: 1216.6
Min nTPM: 1203.1
RHH5243_R3615
1216.6
RHH5272_R3644
1203.1
Terminal effector memory CD8 T-cell nTPM: 1416.3
Samples: 4
Max nTPM: 1834.0
Min nTPM: 1265.8
RHH5232_R3604
1287.8
RHH5204_R3575
1834.0
RHH5261_R3633
1265.8
RHH5296_R3662
1277.4
Vd2 gdTCR nTPM: 1286.1
Samples: 4
Max nTPM: 1974.2
Min nTPM: 996.0
RHH5234_R3606
996.0
RHH5206_R3577
1974.2
RHH5263_R3635
1107.8
RHH5298_R3664
1066.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.