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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
873.6
nTPM
Monaco:
4624.0
nTPM
Schmiedel:
8142.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
873.6
HPA sample
nTPM
gdT-cell nTPM: 735.2
Samples: 6
Max nTPM: 1645.9
Min nTPM: 439.2
P10809_1007
1645.9
P10809_1022
456.8
P10809_1041
649.4
P10809_1060
439.2
P10809_1077
679.2
P10809_1098
540.6
MAIT T-cell nTPM: 842.4
Samples: 6
Max nTPM: 1424.6
Min nTPM: 529.6
P10809_1006
1424.6
P10809_1024
630.2
P10809_1043
546.8
P10809_1062
740.9
P10809_1083
1182.0
P10809_1097
529.6
Memory CD4 T-cell nTPM: 778.9
Samples: 6
Max nTPM: 1644.7
Min nTPM: 423.7
P10809_1014
1644.7
P10809_1026
769.9
P10809_1045
574.2
P10809_1064
651.0
P10809_1086
610.1
P10809_1113
423.7
Memory CD8 T-cell nTPM: 800.1
Samples: 5
Max nTPM: 1496.5
Min nTPM: 408.8
P10809_1012
1496.5
P10809_1027
833.0
P10809_1046
524.0
P10809_1065
738.0
P10809_1111
408.8
Naive CD4 T-cell nTPM: 762.8
Samples: 6
Max nTPM: 1788.6
Min nTPM: 367.5
P10809_1015
1788.6
P10809_1030
787.0
P10809_1049
453.7
P10809_1068
501.0
P10809_1085
679.2
P10809_1112
367.5
Naive CD8 T-cell nTPM: 873.6
Samples: 6
Max nTPM: 1908.3
Min nTPM: 494.3
P10809_1016
1908.3
P10809_1031
841.9
P10809_1050
722.8
P10809_1069
612.9
P10809_1087
661.3
P10809_1110
494.3
T-reg nTPM: 636.9
Samples: 6
Max nTPM: 1392.1
Min nTPM: 393.2
P10809_1018
1392.1
P10809_1037
470.3
P10809_1056
701.0
P10809_1075
427.4
P10809_1094
437.5
P10809_1106
393.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4624.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2139.6
Samples: 4
Max nTPM: 2763.6
Min nTPM: 1534.0
RHH5202_R3573
2763.6
RHH5230_R3602
2116.7
RHH5259_R3631
1534.0
RHH5288_R3660
2143.9
Effector memory CD8 T-cell nTPM: 3424.4
Samples: 4
Max nTPM: 5133.9
Min nTPM: 2085.1
RHH5203_R3574
2085.1
RHH5231_R3603
5133.9
RHH5260_R3632
4219.5
RHH5289_R3661
2259.1
MAIT T-cell nTPM: 3215.8
Samples: 4
Max nTPM: 4003.2
Min nTPM: 2446.6
RHH5233_R3605
3283.1
RHH5205_R3576
2446.6
RHH5262_R3634
4003.2
RHH5297_R3663
3130.3
Memory CD4 T-cell TFH nTPM: 2564.3
Samples: 4
Max nTPM: 3734.9
Min nTPM: 1701.0
RHH5300_R3666
1975.0
RHH5236_R3608
3734.9
RHH5265_R3637
1701.0
RHH5208_R3579
2846.4
Memory CD4 T-cell Th1 nTPM: 2174.5
Samples: 4
Max nTPM: 2513.0
Min nTPM: 1628.0
RHH5210_R3581
2513.0
RHH5302_R3668
2279.8
RHH5238_R3610
1628.0
RHH5267_R3639
2277.3
Memory CD4 T-cell Th1/Th17 nTPM: 3652.3
Samples: 4
Max nTPM: 6807.8
Min nTPM: 1964.2
RHH5303_R3669
3217.1
RHH5211_R3582
6807.8
RHH5239_R3611
1964.2
RHH5268_R3640
2619.9
Memory CD4 T-cell Th17 nTPM: 4624.0
Samples: 4
Max nTPM: 6934.0
Min nTPM: 2096.7
RHH5304_R3670
3659.2
RHH5212_R3583
5806.1
RHH5240_R3612
6934.0
RHH5269_R3641
2096.7
Memory CD4 T-cell Th2 nTPM: 3348.5
Samples: 4
Max nTPM: 5043.0
Min nTPM: 2359.6
RHH5305_R3671
3430.1
RHH5213_R3584
5043.0
RHH5241_R3613
2359.6
RHH5270_R3642
2561.1
Naive CD4 T-cell nTPM: 2685.0
Samples: 4
Max nTPM: 4152.3
Min nTPM: 2059.5
RHH5306_R3672
2059.5
RHH5214_R3585
4152.3
RHH5242_R3614
2238.1
RHH5271_R3643
2290.1
Naive CD8 T-cell nTPM: 3267.5
Samples: 4
Max nTPM: 4672.5
Min nTPM: 2425.3
RHH5201_R3572
2792.7
RHH5229_R3601
4672.5
RHH5258_R3630
2425.3
RHH5287_R3659
3179.5
Non-Vd2 gdTCR nTPM: 3230.3
Samples: 4
Max nTPM: 5606.3
Min nTPM: 2276.4
RHH5235_R3607
2376.7
RHH5264_R3636
5606.3
RHH5207_R3578
2661.8
RHH5299_R3665
2276.4
T-reg nTPM: 2611.2
Samples: 4
Max nTPM: 3964.0
Min nTPM: 1947.7
RHH5301_R3667
2095.2
RHH5237_R3609
3964.0
RHH5266_R3638
1947.7
RHH5209_R3580
2438.0
Terminal effector memory CD4 T-cell nTPM: 3071.7
Samples: 2
Max nTPM: 3443.6
Min nTPM: 2699.8
RHH5243_R3615
2699.8
RHH5272_R3644
3443.6
Terminal effector memory CD8 T-cell nTPM: 3869.5
Samples: 4
Max nTPM: 5922.7
Min nTPM: 2445.1
RHH5232_R3604
3994.6
RHH5204_R3575
2445.1
RHH5261_R3633
5922.7
RHH5296_R3662
3115.6
Vd2 gdTCR nTPM: 4506.7
Samples: 4
Max nTPM: 6727.5
Min nTPM: 2716.3
RHH5234_R3606
2716.3
RHH5206_R3577
5558.8
RHH5263_R3635
6727.5
RHH5298_R3664
3024.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.