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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:11896.4 nTPM
Monaco:7999.7 nTPM
Schmiedel:23825.0 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 11896.4
HPA sample nTPM
Memory B-cell
nTPM: 11896.4
Samples: 6

Max nTPM: 20675.9
Min nTPM: 8755.4
P10809_1017 10958.0
P10809_1025 9139.4
P10809_1044 20675.9
P10809_1063 12882.2
P10809_1092 8755.4
P10809_1105 8967.3
Naive B-cell
nTPM: 10997.2
Samples: 6

Max nTPM: 14138.1
Min nTPM: 7791.4
P10809_1011 14138.1
P10809_1029 8243.9
P10809_1048 13665.1
P10809_1067 13630.0
P10809_1091 7791.4
P10809_1104 8514.5

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 7999.7
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 7999.7
Samples: 4

Max nTPM: 19843.2
Min nTPM: 1805.5
RHH5310_R3677 5582.8
RHH5218_R3590 1805.5
RHH5247_R3619 19843.2
RHH5276_R3648 4767.4
Naive B-cell
nTPM: 5001.7
Samples: 4

Max nTPM: 6297.7
Min nTPM: 3699.9
RHH5308_R3675 6297.7
RHH5216_R3588 3699.9
RHH5245_R3617 6066.9
RHH5274_R3646 3942.4
Non-switched memory B-cell
nTPM: 5778.6
Samples: 4

Max nTPM: 9340.1
Min nTPM: 2443.5
RHH5309_R3676 5714.1
RHH5217_R3589 2443.5
RHH5246_R3618 9340.1
RHH5275_R3647 5616.6
Plasmablast
nTPM: 6787.2
Samples: 4

Max nTPM: 8409.1
Min nTPM: 4207.4
RHH5312_R3679 8409.1
RHH5220_R3592 4207.4
RHH5249_R3621 8206.5
RHH5278_R3650 6325.6
Switched memory B-cell
nTPM: 4085.0
Samples: 4

Max nTPM: 6619.7
Min nTPM: 2556.4
RHH5311_R3678 6619.7
RHH5219_R3591 3305.5
RHH5248_R3620 2556.4
RHH5277_R3649 3858.4

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 23825.0
Schmiedel sample id TPM
Naive B-cell
TPM: 23825.0
Samples: 91

Max TPM: 51481.1
Min TPM: 17788.8
B_CELL_NAIVE_1 51481.1
B_CELL_NAIVE_2 33790.6
B_CELL_NAIVE_3 32339.0
B_CELL_NAIVE_4 30173.4
B_CELL_NAIVE_5 29803.6
B_CELL_NAIVE_6 29684.4
B_CELL_NAIVE_7 28776.9
B_CELL_NAIVE_8 28375.1
B_CELL_NAIVE_9 28062.0
B_CELL_NAIVE_10 27984.5
B_CELL_NAIVE_11 27365.8
B_CELL_NAIVE_12 26823.7
B_CELL_NAIVE_13 26808.4
B_CELL_NAIVE_14 26793.0
B_CELL_NAIVE_15 26405.1
B_CELL_NAIVE_16 26294.3
B_CELL_NAIVE_17 26058.0
B_CELL_NAIVE_18 25913.8
B_CELL_NAIVE_19 25775.4
B_CELL_NAIVE_20 25712.1
B_CELL_NAIVE_21 25680.9
B_CELL_NAIVE_22 25616.4
B_CELL_NAIVE_23 25598.0
B_CELL_NAIVE_24 25594.1
B_CELL_NAIVE_25 25586.2
B_CELL_NAIVE_26 25507.2
B_CELL_NAIVE_27 25445.2
B_CELL_NAIVE_28 25221.7
B_CELL_NAIVE_29 24830.4
B_CELL_NAIVE_30 24639.2
B_CELL_NAIVE_31 24609.0
B_CELL_NAIVE_32 24583.9
B_CELL_NAIVE_33 24555.7
B_CELL_NAIVE_34 24515.8
B_CELL_NAIVE_35 24475.9
B_CELL_NAIVE_36 24367.6
B_CELL_NAIVE_37 24350.3
B_CELL_NAIVE_38 24244.1
B_CELL_NAIVE_39 24227.0
B_CELL_NAIVE_40 24218.1
B_CELL_NAIVE_41 24034.6
B_CELL_NAIVE_42 23915.5
B_CELL_NAIVE_43 23700.0
B_CELL_NAIVE_44 23637.2
B_CELL_NAIVE_45 23579.4
B_CELL_NAIVE_46 23520.7
B_CELL_NAIVE_47 23335.8
B_CELL_NAIVE_48 23172.2
B_CELL_NAIVE_49 23102.0
B_CELL_NAIVE_50 23067.5
B_CELL_NAIVE_51 22846.4
B_CELL_NAIVE_52 22844.9
B_CELL_NAIVE_53 22709.0
B_CELL_NAIVE_54 22574.3
B_CELL_NAIVE_55 22395.7
B_CELL_NAIVE_56 22311.7
B_CELL_NAIVE_57 22193.6
B_CELL_NAIVE_58 22186.9
B_CELL_NAIVE_59 22102.2
B_CELL_NAIVE_60 21926.9
B_CELL_NAIVE_61 21881.0
B_CELL_NAIVE_62 21810.3
B_CELL_NAIVE_63 21715.3
B_CELL_NAIVE_64 21680.8
B_CELL_NAIVE_65 21537.2
B_CELL_NAIVE_66 21311.7
B_CELL_NAIVE_67 21243.9
B_CELL_NAIVE_68 21102.4
B_CELL_NAIVE_69 21057.9
B_CELL_NAIVE_70 21001.6
B_CELL_NAIVE_71 20996.4
B_CELL_NAIVE_72 20834.9
B_CELL_NAIVE_73 20813.1
B_CELL_NAIVE_74 20744.3
B_CELL_NAIVE_75 20520.3
B_CELL_NAIVE_76 20367.2
B_CELL_NAIVE_77 20173.8
B_CELL_NAIVE_78 19916.1
B_CELL_NAIVE_79 19915.2
B_CELL_NAIVE_80 19849.2
B_CELL_NAIVE_81 19612.4
B_CELL_NAIVE_82 19334.7
B_CELL_NAIVE_83 19288.7
B_CELL_NAIVE_84 19263.4
B_CELL_NAIVE_85 19209.1
B_CELL_NAIVE_86 19078.5
B_CELL_NAIVE_87 19068.1
B_CELL_NAIVE_88 18659.3
B_CELL_NAIVE_89 18515.0
B_CELL_NAIVE_90 18344.8
B_CELL_NAIVE_91 17788.8
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