HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:8.9 nTPM
HPA Brain:26.4 nTPM
GTEx:8.9 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:14.2 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024493Antibody HPA062300
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
1855 Male, age 76, left hemisphere 27.1
1898 Male, age 80, left hemisphere 25.7
2621 Female, age 67, right hemisphere 19.7
1911 Female, age 85, right hemisphere 19.6
2148 Female, age 91, left hemisphere 18.3
2529 Female, age 94, left hemisphere 18.2
Dentate gyrus
nTPM: 20.2
2530 Female, age 94, left hemisphere 23.1
2010 Male, age 76, both hemispheres 21.6
2246 Female, age 85, both hemispheres 21.5
2531 Female, age 67, both hemispheres 20.1
1927 Female, age 91, both hemispheres 18.4
2528 Male, age 74, both hemispheres 16.3
Entorhinal gyrus
nTPM: 26.2
1787 Male, age 76, left hemisphere 29.3
2613 Female, age 94, left hemisphere 28.9
1938 Female, age 85, left hemisphere 28.8
2764 Male, age 80, right hemisphere 26.5
2686 Male, age 75, right hemisphere 25.6
2117 Female, age 91, right hemisphere 18.1
Hippocampus, CA1
nTPM: 21.4
2749 Male, age 80, left hemisphere 25.8
1873 Female, age 85, both hemispheres 22.4
2527 Male, age 74, both hemispheres 20.2
2082 Female, age 91, right hemisphere 19.4
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 23.1
1940 Female, age 85, left hemisphere 30.9
1892 Male, age 76, both hemispheres 24.0
2437 Female, age 94, left hemisphere 23.1
2113 Female, age 91, right hemisphere 22.5
1963 Male, age 80, left hemisphere 20.1
2249 Male, age 74, both hemispheres 18.1
Hippocampus, CA3
nTPM: 21.5
2137 Male, age 80, left hemisphere 23.9
1867 Male, age 76, both hemispheres 23.3
2861 Female, age 67, both hemispheres 23.3
2436 Male, age 74, both hemispheres 22.2
1891 Female, age 85, both hemispheres 20.7
2620 Female, age 94, left hemisphere 15.5
Parahippocampal cortex
nTPM: 26.0
2622 Female, age 67, right hemisphere 32.5
2018 Male, age 76, both hemispheres 29.5
1850 Male, age 80, both hemispheres 29.3
1933 Female, age 85, both hemispheres 27.7
2532 Female, age 72, left hemisphere 26.4
2250 Female, age 67, right hemisphere 24.1
1990 Female, age 91, right hemisphere 24.0
2693 Female, age 94, both hemispheres 23.1
2245 Female, age 91, both hemispheres 21.7
2692 Male, age 74, both hemispheres 21.7
Perirhinal gyrus
nTPM: 26.4
2848 Male, age 76, right hemisphere 28.5
1847 Female, age 91, left hemisphere 27.1
1794 Male, age 80, right hemisphere 26.8
1841 Female, age 85, right hemisphere 24.9
2521 Female, age 94, right hemisphere 24.8
Subiculum
nTPM: 21.6
2438 Female, age 94, left hemisphere 25.2
1977 Female, age 85, both hemispheres 23.7
2042 Male, age 76, both hemispheres 22.1
1901 Male, age 80, both hemispheres 21.0
2619 Male, age 74, both hemispheres 19.6
2729 Female, age 91, right hemisphere 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.9
Samples: 197

Max nTPM: 13.2
Min nTPM: 4.1
Std nTPM: 1.7
Median nTPM: 8.8
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 13.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 12.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 12.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 12.4
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 12.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 12.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 12.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 12.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 12.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 12.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 11.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 29.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 20.3
Min nTPM: 12.9
Sample A Female 20.3
Sample B Female 14.7
Sample C Male 12.9
Sample D Male 13.1
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.6
Min nTPM: 4.4
Sample A Female 9.1
Sample B Female 10.6
Sample C Male 10.5
Sample D Male 4.4
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.2
Sample A Female 17.7
Sample B Female 16.1
Sample C Male 15.2
Sample D Male 18.9
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.5
Sample A Female 11.9
Sample B Female 12.2
Sample C Male 10.0
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 13.0
Sample A Male 13.8
Sample B Male 14.0
Sample C Female 13.0
Sample D Female 15.8
Hippocampal formation
nTPM: 10.2
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.6
Sample A Male 11.1
Sample B Male 9.9
Sample C Female 10.0
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
72004454 Antisense, RP_050915_02_H10, Mouse strain C57BL/6J (56 days, male) 3.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org