HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.4 nTPM
HPA Brain:76.7 nTPM
GTEx:21.4 nTPM
FANTOM5:73.9 Scaled Tags Per Million
Pig:58.1 nTPM
Mouse:56.7 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034488
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.7
Sample id Sample description nTPM
Hippocampus
nTPM: 67.6
2621 Female, age 67, right hemisphere 73.5
1855 Male, age 76, left hemisphere 69.5
1898 Male, age 80, left hemisphere 67.7
2529 Female, age 94, left hemisphere 66.3
2148 Female, age 91, left hemisphere 64.5
1911 Female, age 85, right hemisphere 64.0
Dentate gyrus
nTPM: 65.6
2246 Female, age 85, both hemispheres 69.7
2531 Female, age 67, both hemispheres 68.9
2530 Female, age 94, left hemisphere 68.3
2010 Male, age 76, both hemispheres 66.7
1927 Female, age 91, both hemispheres 65.0
2528 Male, age 74, both hemispheres 55.3
Entorhinal gyrus
nTPM: 76.6
2613 Female, age 94, left hemisphere 90.4
2764 Male, age 80, right hemisphere 80.7
2686 Male, age 75, right hemisphere 77.8
1787 Male, age 76, left hemisphere 74.8
1938 Female, age 85, left hemisphere 69.4
2117 Female, age 91, right hemisphere 66.4
Hippocampus, CA1
nTPM: 67.6
2749 Male, age 80, left hemisphere 73.4
2045 Male, age 76, both hemispheres 72.6
2082 Female, age 91, right hemisphere 66.9
1873 Female, age 85, both hemispheres 63.4
2527 Male, age 74, both hemispheres 61.7
Hippocampus, CA2
nTPM: 65.7
2437 Female, age 94, left hemisphere 74.5
1892 Male, age 76, both hemispheres 73.5
1940 Female, age 85, left hemisphere 66.9
2113 Female, age 91, right hemisphere 63.9
1963 Male, age 80, left hemisphere 58.1
2249 Male, age 74, both hemispheres 57.4
Hippocampus, CA3
nTPM: 73.7
2137 Male, age 80, left hemisphere 80.8
2861 Female, age 67, both hemispheres 80.8
2620 Female, age 94, left hemisphere 79.5
2436 Male, age 74, both hemispheres 73.8
1867 Male, age 76, both hemispheres 65.8
1891 Female, age 85, both hemispheres 61.2
Parahippocampal cortex
nTPM: 75.0
2622 Female, age 67, right hemisphere 95.7
2532 Female, age 72, left hemisphere 79.9
2245 Female, age 91, both hemispheres 78.5
2693 Female, age 94, both hemispheres 78.0
1850 Male, age 80, both hemispheres 73.5
2692 Male, age 74, both hemispheres 72.2
2018 Male, age 76, both hemispheres 71.9
1933 Female, age 85, both hemispheres 68.9
2250 Female, age 67, right hemisphere 65.9
1990 Female, age 91, right hemisphere 65.7
Perirhinal gyrus
nTPM: 76.7
2848 Male, age 76, right hemisphere 85.1
1841 Female, age 85, right hemisphere 77.4
1794 Male, age 80, right hemisphere 76.2
1847 Female, age 91, left hemisphere 74.2
2521 Female, age 94, right hemisphere 70.6
Subiculum
nTPM: 69.9
2438 Female, age 94, left hemisphere 78.5
2042 Male, age 76, both hemispheres 75.0
1901 Male, age 80, both hemispheres 71.6
2619 Male, age 74, both hemispheres 70.6
1977 Female, age 85, both hemispheres 65.2
2729 Female, age 91, right hemisphere 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 40.1
Min nTPM: 8.1
Std nTPM: 5.3
Median nTPM: 21.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 37.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 36.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 34.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 34.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 32.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 31.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 31.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 30.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 30.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.9
FF:10153-102I9 76 years, female 80.3
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.1
Pig sample Sample description nTPM
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 53.4
Min nTPM: 42.8
Sample A Female 53.4
Sample B Female 42.8
Sample C Male 51.1
Sample D Male 44.9
Dorsal hippocampus
nTPM: 58.1
Samples: 4

Max nTPM: 61.0
Min nTPM: 54.3
Sample A Female 61.0
Sample B Female 60.1
Sample C Male 54.3
Sample D Male 56.9
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 54.8
Min nTPM: 38.6
Sample A Female 54.8
Sample B Female 38.6
Sample C Male 46.8
Sample D Male 39.7
Ventral hippocampus
nTPM: 55.5
Samples: 4

Max nTPM: 70.3
Min nTPM: 41.7
Sample A Female 54.5
Sample B Female 41.7
Sample C Male 70.3
Sample D Male 55.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 60.4
Min nTPM: 53.2
Sample A Male 59.5
Sample B Male 60.4
Sample C Female 53.7
Sample D Female 53.2
Hippocampal formation
nTPM: 55.9
Samples: 4

Max nTPM: 59.8
Min nTPM: 51.7
Sample A Male 54.8
Sample B Male 59.8
Sample C Female 51.7
Sample D Female 57.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
69059844 Antisense, RP_050317_04_B10, Mouse strain C57BL/6J (56 days, male) 12.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org