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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1563.2
nTPM
Monaco:
3490.7
nTPM
Schmiedel:
15636.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1563.2
HPA sample
nTPM
gdT-cell nTPM: 873.6
Samples: 6
Max nTPM: 1897.7
Min nTPM: 478.3
P10809_1007
1897.7
P10809_1022
478.3
P10809_1041
743.1
P10809_1060
593.3
P10809_1077
917.3
P10809_1098
611.7
MAIT T-cell nTPM: 1376.0
Samples: 6
Max nTPM: 2559.8
Min nTPM: 838.9
P10809_1006
2559.8
P10809_1024
1067.2
P10809_1043
838.9
P10809_1062
1346.2
P10809_1083
1546.5
P10809_1097
897.4
Memory CD4 T-cell nTPM: 1015.6
Samples: 6
Max nTPM: 2010.5
Min nTPM: 557.3
P10809_1014
2010.5
P10809_1026
1172.5
P10809_1045
557.3
P10809_1064
836.1
P10809_1086
841.8
P10809_1113
675.2
Memory CD8 T-cell nTPM: 1099.3
Samples: 5
Max nTPM: 2205.9
Min nTPM: 569.3
P10809_1012
2205.9
P10809_1027
1191.4
P10809_1046
606.6
P10809_1065
923.3
P10809_1111
569.3
Naive CD4 T-cell nTPM: 1215.7
Samples: 6
Max nTPM: 2728.2
Min nTPM: 473.3
P10809_1015
2728.2
P10809_1030
1359.6
P10809_1049
473.3
P10809_1068
1126.4
P10809_1085
990.6
P10809_1112
615.8
Naive CD8 T-cell nTPM: 1563.2
Samples: 6
Max nTPM: 4178.0
Min nTPM: 788.9
P10809_1016
4178.0
P10809_1031
1459.9
P10809_1050
788.9
P10809_1069
1189.3
P10809_1087
819.8
P10809_1110
943.4
T-reg nTPM: 718.1
Samples: 6
Max nTPM: 1320.1
Min nTPM: 427.6
P10809_1018
1320.1
P10809_1037
631.2
P10809_1056
548.7
P10809_1075
720.7
P10809_1094
660.1
P10809_1106
427.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3490.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2302.8
Samples: 4
Max nTPM: 3508.0
Min nTPM: 1560.2
RHH5202_R3573
2574.0
RHH5230_R3602
1560.2
RHH5259_R3631
1569.1
RHH5288_R3660
3508.0
Effector memory CD8 T-cell nTPM: 1448.3
Samples: 4
Max nTPM: 1837.0
Min nTPM: 1148.9
RHH5203_R3574
1583.5
RHH5231_R3603
1837.0
RHH5260_R3632
1223.8
RHH5289_R3661
1148.9
MAIT T-cell nTPM: 3233.8
Samples: 4
Max nTPM: 4835.7
Min nTPM: 1797.8
RHH5233_R3605
3398.1
RHH5205_R3576
1797.8
RHH5262_R3634
2903.5
RHH5297_R3663
4835.7
Memory CD4 T-cell TFH nTPM: 2735.8
Samples: 4
Max nTPM: 3101.9
Min nTPM: 1708.6
RHH5300_R3666
3054.6
RHH5236_R3608
3078.2
RHH5265_R3637
1708.6
RHH5208_R3579
3101.9
Memory CD4 T-cell Th1 nTPM: 2647.2
Samples: 4
Max nTPM: 4370.0
Min nTPM: 1626.8
RHH5210_R3581
2959.3
RHH5302_R3668
4370.0
RHH5238_R3610
1626.8
RHH5267_R3639
1632.5
Memory CD4 T-cell Th1/Th17 nTPM: 2614.6
Samples: 4
Max nTPM: 4230.7
Min nTPM: 1496.9
RHH5303_R3669
4230.7
RHH5211_R3582
2795.2
RHH5239_R3611
1496.9
RHH5268_R3640
1935.6
Memory CD4 T-cell Th17 nTPM: 1870.3
Samples: 4
Max nTPM: 2814.9
Min nTPM: 1167.8
RHH5304_R3670
2135.6
RHH5212_R3583
2814.9
RHH5240_R3612
1167.8
RHH5269_R3641
1362.8
Memory CD4 T-cell Th2 nTPM: 2527.1
Samples: 4
Max nTPM: 3179.1
Min nTPM: 1749.4
RHH5305_R3671
2676.9
RHH5213_R3584
2503.1
RHH5241_R3613
3179.1
RHH5270_R3642
1749.4
Naive CD4 T-cell nTPM: 2835.0
Samples: 4
Max nTPM: 4164.7
Min nTPM: 1772.4
RHH5306_R3672
3051.9
RHH5214_R3585
4164.7
RHH5242_R3614
2351.0
RHH5271_R3643
1772.4
Naive CD8 T-cell nTPM: 2788.4
Samples: 4
Max nTPM: 3264.4
Min nTPM: 1762.3
RHH5201_R3572
2946.5
RHH5229_R3601
1762.3
RHH5258_R3630
3264.4
RHH5287_R3659
3180.5
Non-Vd2 gdTCR nTPM: 2441.9
Samples: 4
Max nTPM: 4004.8
Min nTPM: 1281.2
RHH5235_R3607
1281.2
RHH5264_R3636
2554.5
RHH5207_R3578
1927.0
RHH5299_R3665
4004.8
T-reg nTPM: 2260.1
Samples: 4
Max nTPM: 3280.5
Min nTPM: 1359.5
RHH5301_R3667
3280.5
RHH5237_R3609
2495.1
RHH5266_R3638
1359.5
RHH5209_R3580
1905.4
Terminal effector memory CD4 T-cell nTPM: 2182.9
Samples: 2
Max nTPM: 2954.6
Min nTPM: 1411.2
RHH5243_R3615
1411.2
RHH5272_R3644
2954.6
Terminal effector memory CD8 T-cell nTPM: 2787.6
Samples: 4
Max nTPM: 4116.6
Min nTPM: 1454.6
RHH5232_R3604
2538.4
RHH5204_R3575
4116.6
RHH5261_R3633
1454.6
RHH5296_R3662
3040.7
Vd2 gdTCR nTPM: 3490.7
Samples: 4
Max nTPM: 5643.9
Min nTPM: 1991.1
RHH5234_R3606
2605.8
RHH5206_R3577
3722.1
RHH5263_R3635
1991.1
RHH5298_R3664
5643.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.