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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
924.4
nTPM
Monaco:
5255.5
nTPM
Schmiedel:
9899.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
924.4
HPA sample
nTPM
gdT-cell nTPM: 772.6
Samples: 6
Max nTPM: 2088.2
Min nTPM: 426.5
P10809_1007
2088.2
P10809_1022
545.4
P10809_1041
608.7
P10809_1060
446.5
P10809_1077
520.0
P10809_1098
426.5
MAIT T-cell nTPM: 924.4
Samples: 6
Max nTPM: 1828.5
Min nTPM: 486.6
P10809_1006
1828.5
P10809_1024
736.2
P10809_1043
584.2
P10809_1062
851.6
P10809_1083
1059.5
P10809_1097
486.6
Memory CD4 T-cell nTPM: 756.1
Samples: 6
Max nTPM: 1827.5
Min nTPM: 412.9
P10809_1014
1827.5
P10809_1026
699.7
P10809_1045
523.1
P10809_1064
600.8
P10809_1086
472.5
P10809_1113
412.9
Memory CD8 T-cell nTPM: 838.7
Samples: 5
Max nTPM: 1824.2
Min nTPM: 336.2
P10809_1012
1824.2
P10809_1027
764.4
P10809_1046
556.5
P10809_1065
712.4
P10809_1111
336.2
Naive CD4 T-cell nTPM: 731.3
Samples: 6
Max nTPM: 2080.3
Min nTPM: 323.2
P10809_1015
2080.3
P10809_1030
609.1
P10809_1049
373.4
P10809_1068
551.4
P10809_1085
450.5
P10809_1112
323.2
Naive CD8 T-cell nTPM: 871.4
Samples: 6
Max nTPM: 2405.0
Min nTPM: 417.4
P10809_1016
2405.0
P10809_1031
694.9
P10809_1050
647.3
P10809_1069
640.1
P10809_1087
417.4
P10809_1110
423.4
T-reg nTPM: 630.1
Samples: 6
Max nTPM: 1466.8
Min nTPM: 353.2
P10809_1018
1466.8
P10809_1037
496.7
P10809_1056
462.8
P10809_1075
558.6
P10809_1094
442.2
P10809_1106
353.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5255.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3584.6
Samples: 4
Max nTPM: 4105.6
Min nTPM: 2697.1
RHH5202_R3573
4105.6
RHH5230_R3602
3582.1
RHH5259_R3631
2697.1
RHH5288_R3660
3953.6
Effector memory CD8 T-cell nTPM: 3881.8
Samples: 4
Max nTPM: 4248.6
Min nTPM: 3352.7
RHH5203_R3574
3352.7
RHH5231_R3603
4248.6
RHH5260_R3632
3949.1
RHH5289_R3661
3976.7
MAIT T-cell nTPM: 5255.5
Samples: 4
Max nTPM: 6473.3
Min nTPM: 4009.9
RHH5233_R3605
5230.4
RHH5205_R3576
4009.9
RHH5262_R3634
6473.3
RHH5297_R3663
5308.5
Memory CD4 T-cell TFH nTPM: 4099.6
Samples: 4
Max nTPM: 5186.3
Min nTPM: 3139.5
RHH5300_R3666
3221.4
RHH5236_R3608
5186.3
RHH5265_R3637
3139.5
RHH5208_R3579
4851.1
Memory CD4 T-cell Th1 nTPM: 3718.5
Samples: 4
Max nTPM: 4321.9
Min nTPM: 2868.9
RHH5210_R3581
4321.9
RHH5302_R3668
3977.1
RHH5238_R3610
2868.9
RHH5267_R3639
3706.1
Memory CD4 T-cell Th1/Th17 nTPM: 4332.4
Samples: 4
Max nTPM: 5226.0
Min nTPM: 3306.8
RHH5303_R3669
5226.0
RHH5211_R3582
4722.3
RHH5239_R3611
3306.8
RHH5268_R3640
4074.4
Memory CD4 T-cell Th17 nTPM: 4414.1
Samples: 4
Max nTPM: 5214.0
Min nTPM: 3491.6
RHH5304_R3670
4329.4
RHH5212_R3583
4621.2
RHH5240_R3612
5214.0
RHH5269_R3641
3491.6
Memory CD4 T-cell Th2 nTPM: 4202.4
Samples: 4
Max nTPM: 5117.4
Min nTPM: 3672.6
RHH5305_R3671
3672.6
RHH5213_R3584
5117.4
RHH5241_R3613
4030.8
RHH5270_R3642
3988.9
Naive CD4 T-cell nTPM: 4213.6
Samples: 4
Max nTPM: 5419.3
Min nTPM: 3710.5
RHH5306_R3672
3710.5
RHH5214_R3585
5419.3
RHH5242_R3614
3820.5
RHH5271_R3643
3904.1
Naive CD8 T-cell nTPM: 4695.5
Samples: 4
Max nTPM: 6016.1
Min nTPM: 3812.6
RHH5201_R3572
4776.9
RHH5229_R3601
3812.6
RHH5258_R3630
4176.5
RHH5287_R3659
6016.1
Non-Vd2 gdTCR nTPM: 4172.1
Samples: 4
Max nTPM: 4793.7
Min nTPM: 3924.6
RHH5235_R3607
3931.1
RHH5264_R3636
4793.7
RHH5207_R3578
4038.8
RHH5299_R3665
3924.6
T-reg nTPM: 4171.7
Samples: 4
Max nTPM: 5498.4
Min nTPM: 3431.8
RHH5301_R3667
3554.4
RHH5237_R3609
5498.4
RHH5266_R3638
3431.8
RHH5209_R3580
4202.0
Terminal effector memory CD4 T-cell nTPM: 5038.9
Samples: 2
Max nTPM: 5631.1
Min nTPM: 4446.7
RHH5243_R3615
4446.7
RHH5272_R3644
5631.1
Terminal effector memory CD8 T-cell nTPM: 4801.1
Samples: 4
Max nTPM: 6110.4
Min nTPM: 3616.8
RHH5232_R3604
6110.4
RHH5204_R3575
3616.8
RHH5261_R3633
5114.9
RHH5296_R3662
4362.3
Vd2 gdTCR nTPM: 4831.0
Samples: 4
Max nTPM: 5514.1
Min nTPM: 4303.3
RHH5234_R3606
4572.6
RHH5206_R3577
4303.3
RHH5263_R3635
5514.1
RHH5298_R3664
4934.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.