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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
137.1
nTPM
Monaco:
369.8
nTPM
Schmiedel:
66.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.1
HPA sample
nTPM
gdT-cell nTPM: 80.5
Samples: 6
Max nTPM: 104.0
Min nTPM: 60.3
P10809_1007
60.3
P10809_1022
83.6
P10809_1041
70.7
P10809_1060
73.7
P10809_1077
90.7
P10809_1098
104.0
MAIT T-cell nTPM: 95.6
Samples: 6
Max nTPM: 141.0
Min nTPM: 64.7
P10809_1006
77.8
P10809_1024
103.1
P10809_1043
64.7
P10809_1062
101.5
P10809_1083
141.0
P10809_1097
85.5
Memory CD4 T-cell nTPM: 110.2
Samples: 6
Max nTPM: 134.7
Min nTPM: 88.0
P10809_1014
97.5
P10809_1026
90.0
P10809_1045
88.0
P10809_1064
122.5
P10809_1086
128.2
P10809_1113
134.7
Memory CD8 T-cell nTPM: 95.8
Samples: 5
Max nTPM: 124.0
Min nTPM: 66.7
P10809_1012
85.8
P10809_1027
93.1
P10809_1046
66.7
P10809_1065
109.3
P10809_1111
124.0
Naive CD4 T-cell nTPM: 137.1
Samples: 6
Max nTPM: 175.3
Min nTPM: 100.9
P10809_1015
140.2
P10809_1030
129.3
P10809_1049
100.9
P10809_1068
175.3
P10809_1085
145.9
P10809_1112
130.8
Naive CD8 T-cell nTPM: 110.4
Samples: 6
Max nTPM: 136.9
Min nTPM: 89.8
P10809_1016
113.5
P10809_1031
90.7
P10809_1050
89.8
P10809_1069
136.9
P10809_1087
112.4
P10809_1110
119.3
T-reg nTPM: 135.3
Samples: 6
Max nTPM: 164.6
Min nTPM: 103.5
P10809_1018
121.1
P10809_1037
103.5
P10809_1056
164.6
P10809_1075
138.0
P10809_1094
140.9
P10809_1106
143.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
369.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 278.7
Samples: 4
Max nTPM: 288.3
Min nTPM: 259.7
RHH5202_R3573
280.6
RHH5230_R3602
286.3
RHH5259_R3631
259.7
RHH5288_R3660
288.3
Effector memory CD8 T-cell nTPM: 326.5
Samples: 4
Max nTPM: 414.8
Min nTPM: 257.5
RHH5203_R3574
367.3
RHH5231_R3603
257.5
RHH5260_R3632
266.4
RHH5289_R3661
414.8
MAIT T-cell nTPM: 271.7
Samples: 4
Max nTPM: 296.0
Min nTPM: 261.6
RHH5233_R3605
266.2
RHH5205_R3576
261.6
RHH5262_R3634
296.0
RHH5297_R3663
262.9
Memory CD4 T-cell TFH nTPM: 309.2
Samples: 4
Max nTPM: 353.5
Min nTPM: 254.1
RHH5300_R3666
254.1
RHH5236_R3608
353.5
RHH5265_R3637
300.0
RHH5208_R3579
329.0
Memory CD4 T-cell Th1 nTPM: 299.8
Samples: 4
Max nTPM: 367.0
Min nTPM: 215.0
RHH5210_R3581
367.0
RHH5302_R3668
298.7
RHH5238_R3610
215.0
RHH5267_R3639
318.3
Memory CD4 T-cell Th1/Th17 nTPM: 285.4
Samples: 4
Max nTPM: 350.5
Min nTPM: 238.8
RHH5303_R3669
350.5
RHH5211_R3582
261.6
RHH5239_R3611
290.6
RHH5268_R3640
238.8
Memory CD4 T-cell Th17 nTPM: 322.7
Samples: 4
Max nTPM: 380.6
Min nTPM: 278.6
RHH5304_R3670
287.6
RHH5212_R3583
343.9
RHH5240_R3612
380.6
RHH5269_R3641
278.6
Memory CD4 T-cell Th2 nTPM: 326.0
Samples: 4
Max nTPM: 412.9
Min nTPM: 252.2
RHH5305_R3671
252.2
RHH5213_R3584
312.5
RHH5241_R3613
412.9
RHH5270_R3642
326.3
Naive CD4 T-cell nTPM: 338.5
Samples: 4
Max nTPM: 383.2
Min nTPM: 299.7
RHH5306_R3672
331.1
RHH5214_R3585
383.2
RHH5242_R3614
299.7
RHH5271_R3643
340.1
Naive CD8 T-cell nTPM: 369.8
Samples: 4
Max nTPM: 400.5
Min nTPM: 316.5
RHH5201_R3572
377.1
RHH5229_R3601
316.5
RHH5258_R3630
400.5
RHH5287_R3659
385.1
Non-Vd2 gdTCR nTPM: 270.8
Samples: 4
Max nTPM: 325.2
Min nTPM: 231.9
RHH5235_R3607
268.9
RHH5264_R3636
257.3
RHH5207_R3578
325.2
RHH5299_R3665
231.9
T-reg nTPM: 318.2
Samples: 4
Max nTPM: 442.1
Min nTPM: 262.7
RHH5301_R3667
262.7
RHH5237_R3609
442.1
RHH5266_R3638
281.8
RHH5209_R3580
286.0
Terminal effector memory CD4 T-cell nTPM: 279.3
Samples: 2
Max nTPM: 323.8
Min nTPM: 234.7
RHH5243_R3615
234.7
RHH5272_R3644
323.8
Terminal effector memory CD8 T-cell nTPM: 290.8
Samples: 4
Max nTPM: 320.7
Min nTPM: 276.0
RHH5232_R3604
290.3
RHH5204_R3575
276.2
RHH5261_R3633
276.0
RHH5296_R3662
320.7
Vd2 gdTCR nTPM: 301.2
Samples: 4
Max nTPM: 351.2
Min nTPM: 257.0
RHH5234_R3606
351.2
RHH5206_R3577
257.0
RHH5263_R3635
292.4
RHH5298_R3664
304.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
