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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
277.9
nTPM
FANTOM5:
326.7
Scaled Tags Per Million
Pig:
146.0
nTPM
Allen mouse:
12.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
277.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 143.1
1984
Male, age 76, both hemispheres
174.5
2301
Female, age 85, both hemispheres
155.1
2188
Female, age 91, both hemispheres
124.4
2090
Male, age 80, both hemispheres
118.4
Dorsal cochlear nucleus nTPM: 146.9
2058
Male, age 76, both hemispheres
164.6
2370
Male, age 61, both hemispheres
162.2
2802
Male, age 74, right hemisphere
149.6
2187
Female, age 91, both hemispheres
133.5
2378
Male, age 80, both hemispheres
124.5
Dorsal tegmental nucleus nTPM: 132.9
2083
Male, age 80, both hemispheres
157.4
1936
Male, age 76, left hemisphere
144.1
2358
Male, age 61, both hemispheres
128.6
2326
Male, age 74, both hemispheres
101.6
Dorsolateral tegmental area nTPM: 128.0
2141
Male, age 76, both hemispheres
175.9
2654
Male, age 80, both hemispheres
148.9
2751
Female, age 85, both hemispheres
142.7
2360
Male, age 74, both hemispheres
103.2
2337
Male, age 61, both hemispheres
69.0
Kolliker-Fuse nucleus nTPM: 147.3
2163
Male, age 80, both hemispheres
167.8
2793
Female, age 91, left hemisphere
164.5
2315
Male, age 76, right hemisphere
109.5
Lateral lemniscal nuclei nTPM: 243.8
2453
Male, age 74, right hemisphere
278.9
2169
Male, age 76, both hemispheres
268.8
2036
Male, age 80, both hemispheres
259.2
2746
Female, age 85, left hemisphere
233.7
2320
Female, age 91, left hemisphere
178.4
Lateral parabrachial nucleus nTPM: 172.4
2139
Female, age 85, right hemisphere
251.5
2790
Male, age 61, both hemispheres
194.0
2013
Male, age 80, both hemispheres
154.7
2792
Male, age 76, both hemispheres
89.2
Lateral vestibular nucleus nTPM: 152.8
2184
Male, age 76, both hemispheres
180.1
2311
Male, age 80, both hemispheres
125.4
Locus coeruleus nTPM: 191.8
2123
Female, age 91, both hemispheres
231.7
2720
Male, age 74, both hemispheres
199.9
2162
Male, age 80, both hemispheres
192.3
1980
Male, age 76, both hemispheres
191.9
2014
Male, age 55, unknown
190.6
2317
Female, age 72, unknown
178.0
2788
Male, age 74, unknown
158.6
Medial parabrachial nucleus nTPM: 157.4
2156
Male, age 61, both hemispheres
175.1
2854
Male, age 80, both hemispheres
171.6
2786
Male, age 76, both hemispheres
162.4
2463
Female, age 85, right hemisphere
139.7
2170
Female, age 91, both hemispheres
138.2
Medial periolivary nuclei nTPM: 231.2
2171
Female, age 85, both hemispheres
331.6
2063
Male, age 76, both hemispheres
291.0
2791
Male, age 74, right hemisphere
222.5
2458
Female, age 91, both hemispheres
168.3
2081
Male, age 80, both hemispheres
142.5
Motor facial nucleus nTPM: 236.4
2062
Male, age 76, both hemispheres
310.7
2327
Male, age 80, both hemispheres
252.1
2365
Male, age 74, right hemisphere
238.3
2795
Female, age 91, both hemispheres
222.3
2697
Female, age 85, both hemispheres
218.9
2126
Male, age 61, both hemispheres
175.7
Motor trigeminal nucleus nTPM: 184.8
2079
Male, age 80, both hemispheres
221.7
2560
Male, age 74, both hemispheres
217.3
2309
Male, age 76, both hemispheres
167.8
2335
Male, age 61, both hemispheres
165.7
2321
Female, age 91, both hemispheres
151.3
Nuclei of the trapezoid body nTPM: 274.9
2735
Female, age 85, both hemispheres
351.0
2159
Male, age 61, both hemispheres
321.6
1983
Male, age 76, both hemispheres
279.1
2368
Female, age 91, both hemispheres
219.7
2166
Male, age 80, both hemispheres
203.0
Nucleus raphe magnus nTPM: 277.9
2160
Male, age 61, both hemispheres
392.7
2172
Female, age 85, both hemispheres
364.4
2455
Male, age 74, both hemispheres
286.5
2328
Male, age 80, both hemispheres
222.7
2051
Male, age 76, both hemispheres
213.1
2459
Female, age 91, both hemispheres
187.9
Paramedian reticular nucleus nTPM: 179.3
2050
Female, age 85, both hemispheres
244.9
2313
Male, age 61, both hemispheres
195.1
2057
Male, age 80, both hemispheres
174.1
2052
Male, age 76, both hemispheres
103.0
Pedunculopontine tegmental nucleus nTPM: 150.4
1921
Female, age 85, both hemispheres
182.4
2334
Male, age 80, both hemispheres
145.0
2338
Male, age 61, both hemispheres
123.7
Pontine nuclei nTPM: 241.0
2787
Female, age 85, both hemispheres
358.3
2727
Male, age 61, right hemisphere
328.8
1863
Male, age 55, unknown
276.7
1968
Male, age 76, left hemisphere
264.8
2109
Female, age 72, unknown
228.9
2454
Male, age 74, left hemisphere
171.2
2115
Male, age 80, left hemisphere
164.4
2319
Female, age 91, both hemispheres
134.6
Pontine raphe nucleus nTPM: 217.8
2122
Female, age 85, midline
256.2
2853
Male, age 76, midline
179.4
Posteroventral cochlear nucleus nTPM: 133.5
2752
Female, age 85, both hemispheres
212.3
2070
Male, age 76, both hemispheres
152.3
2371
Male, age 61, both hemispheres
150.0
2341
Male, age 80, both hemispheres
88.8
2135
Female, age 91, both hemispheres
64.1
Principal sensory trigeminal nucleus nTPM: 229.2
2158
Male, age 61, both hemispheres
348.3
2008
Male, age 80, left hemisphere
247.7
2324
Male, age 76, both hemispheres
163.3
2367
Female, age 91, left hemisphere
157.7
Reticular pontine nucleus, caudal nTPM: 191.9
2332
Male, age 80, right hemisphere
255.8
2092
Male, age 76, both hemispheres
209.5
2457
Female, age 91, both hemispheres
173.8
2559
Male, age 74, both hemispheres
128.5
Reticular pontine nucleus, oral nTPM: 179.3
2361
Male, age 74, both hemispheres
230.4
2012
Female, age 85, both hemispheres
215.5
2167
Male, age 76, both hemispheres
160.8
1939
Male, age 80, both hemispheres
148.5
2366
Female, age 91, both hemispheres
141.3
Reticulotegmental nucleus nTPM: 180.1
2325
Male, age 76, both hemispheres
221.2
2452
Male, age 74, both hemispheres
182.3
2333
Male, age 80, both hemispheres
166.5
2322
Female, age 91, both hemispheres
150.6
Spinal trigeminal nucleus, oral nTPM: 172.1
2737
Female, age 85, both hemispheres
191.6
1978
Male, age 76, both hemispheres
166.1
2164
Male, age 80, both hemispheres
158.8
Subcoeruleus area nTPM: 179.1
2089
Male, age 76, left hemisphere
233.0
2323
Female, age 91, left hemisphere
199.2
1958
Male, age 80, both hemispheres
197.4
2451
Male, age 74, both hemispheres
149.6
2369
Female, age 85, left hemisphere
116.4
Superior olive nTPM: 223.3
1875
Female, age 85, both hemispheres
292.1
2561
Female, age 91, both hemispheres
216.0
2329
Male, age 80, right hemisphere
210.4
2020
Male, age 76, both hemispheres
204.1
2364
Male, age 74, right hemisphere
193.9
Ventral periolivary nuclei nTPM: 244.5
2130
Female, age 85, both hemispheres
308.9
2165
Male, age 80, both hemispheres
256.3
2794
Female, age 91, left hemisphere
221.8
2023
Male, age 76, both hemispheres
191.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 200.4
2449
Male, age 74, both hemispheres
263.5
1959
Male, age 76, both hemispheres
230.8
2161
Male, age 80, both hemispheres
194.0
2840
Female, age 85, both hemispheres
185.6
2456
Female, age 91, both hemispheres
175.7
2359
Male, age 61, both hemispheres
153.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
146.0
Pig sample
Sample description
nTPM
Pons nTPM: 146.0
Samples: 4
Max nTPM: 192.9
Min nTPM: 123.8
Sample A
Female
192.9
Sample B
Female
123.8
Sample C
Male
126.1
Sample D
Male
141.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
