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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
142294.9
nTPM
Pig:
116970.5
nTPM
Allen mouse:
26.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
142294.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 92640.6
2301
Female, age 85, both hemispheres
144829.9
1984
Male, age 76, both hemispheres
84881.6
2188
Female, age 91, both hemispheres
76124.6
2090
Male, age 80, both hemispheres
64726.5
Dorsal cochlear nucleus nTPM: 123246.4
2378
Male, age 80, both hemispheres
178445.0
2802
Male, age 74, right hemisphere
166187.1
2058
Male, age 76, both hemispheres
109693.7
2187
Female, age 91, both hemispheres
83298.0
2370
Male, age 61, both hemispheres
78608.3
Dorsal tegmental nucleus nTPM: 96207.1
2358
Male, age 61, both hemispheres
133909.9
1936
Male, age 76, left hemisphere
90699.9
2083
Male, age 80, both hemispheres
82177.8
2326
Male, age 74, both hemispheres
78040.9
Dorsolateral tegmental area nTPM: 68100.1
2141
Male, age 76, both hemispheres
93380.3
2654
Male, age 80, both hemispheres
82827.3
2337
Male, age 61, both hemispheres
67961.8
2751
Female, age 85, both hemispheres
56627.9
2360
Male, age 74, both hemispheres
39703.1
Kolliker-Fuse nucleus nTPM: 86900.2
2793
Female, age 91, left hemisphere
130696.6
2163
Male, age 80, both hemispheres
90263.9
2315
Male, age 76, right hemisphere
39740.2
Lateral lemniscal nuclei nTPM: 93094.9
2320
Female, age 91, left hemisphere
147246.8
2453
Male, age 74, right hemisphere
110951.0
2169
Male, age 76, both hemispheres
98641.8
2036
Male, age 80, both hemispheres
72627.5
2746
Female, age 85, left hemisphere
36007.2
Lateral parabrachial nucleus nTPM: 61606.4
2790
Male, age 61, both hemispheres
90270.9
2792
Male, age 76, both hemispheres
61008.3
2139
Female, age 85, right hemisphere
50935.3
2013
Male, age 80, both hemispheres
44211.0
Lateral vestibular nucleus nTPM: 111275.5
2184
Male, age 76, both hemispheres
120559.1
2311
Male, age 80, both hemispheres
101991.8
Locus coeruleus nTPM: 94146.9
2720
Male, age 74, both hemispheres
158991.5
2162
Male, age 80, both hemispheres
126995.5
2317
Female, age 72, unknown
80626.5
1980
Male, age 76, both hemispheres
78213.3
2788
Male, age 74, unknown
76804.1
2014
Male, age 55, unknown
72128.4
2123
Female, age 91, both hemispheres
65268.8
Medial parabrachial nucleus nTPM: 75613.5
2854
Male, age 80, both hemispheres
98874.3
2786
Male, age 76, both hemispheres
94738.3
2156
Male, age 61, both hemispheres
81030.7
2170
Female, age 91, both hemispheres
57791.0
2463
Female, age 85, right hemisphere
45633.2
Medial periolivary nuclei nTPM: 85996.9
2458
Female, age 91, both hemispheres
140189.5
2171
Female, age 85, both hemispheres
89952.7
2063
Male, age 76, both hemispheres
83311.4
2791
Male, age 74, right hemisphere
58548.6
2081
Male, age 80, both hemispheres
57982.5
Motor facial nucleus nTPM: 131818.6
2795
Female, age 91, both hemispheres
267927.7
2327
Male, age 80, both hemispheres
176883.0
2697
Female, age 85, both hemispheres
128135.6
2062
Male, age 76, both hemispheres
85294.5
2126
Male, age 61, both hemispheres
70724.2
2365
Male, age 74, right hemisphere
61946.7
Motor trigeminal nucleus nTPM: 97214.3
2321
Female, age 91, both hemispheres
144141.1
2560
Male, age 74, both hemispheres
104426.6
2309
Male, age 76, both hemispheres
85691.5
2335
Male, age 61, both hemispheres
80049.3
2079
Male, age 80, both hemispheres
71763.2
Nuclei of the trapezoid body nTPM: 97252.8
2368
Female, age 91, both hemispheres
159000.5
2166
Male, age 80, both hemispheres
104377.6
1983
Male, age 76, both hemispheres
84200.1
2735
Female, age 85, both hemispheres
70470.4
2159
Male, age 61, both hemispheres
68215.6
Nucleus raphe magnus nTPM: 102933.6
2459
Female, age 91, both hemispheres
149207.7
2328
Male, age 80, both hemispheres
141628.7
2172
Female, age 85, both hemispheres
109230.0
2455
Male, age 74, both hemispheres
81262.0
2051
Male, age 76, both hemispheres
77316.2
2160
Male, age 61, both hemispheres
58957.0
Paramedian reticular nucleus nTPM: 76224.0
2313
Male, age 61, both hemispheres
106842.7
2050
Female, age 85, both hemispheres
75323.8
2052
Male, age 76, both hemispheres
67421.6
2057
Male, age 80, both hemispheres
55307.9
Pedunculopontine tegmental nucleus nTPM: 81972.9
2334
Male, age 80, both hemispheres
108659.2
2338
Male, age 61, both hemispheres
77214.7
1921
Female, age 85, both hemispheres
60044.8
Pontine nuclei nTPM: 64677.3
2319
Female, age 91, both hemispheres
100728.2
1968
Male, age 76, left hemisphere
69417.5
2115
Male, age 80, left hemisphere
69204.2
2787
Female, age 85, both hemispheres
67071.9
2454
Male, age 74, left hemisphere
63940.5
1863
Male, age 55, unknown
63247.9
2109
Female, age 72, unknown
45307.5
2727
Male, age 61, right hemisphere
38500.8
Pontine raphe nucleus nTPM: 86024.8
2853
Male, age 76, midline
97940.0
2122
Female, age 85, midline
74109.7
Posteroventral cochlear nucleus nTPM: 73525.5
2341
Male, age 80, both hemispheres
98695.3
2371
Male, age 61, both hemispheres
82797.0
2752
Female, age 85, both hemispheres
80522.0
2070
Male, age 76, both hemispheres
58019.9
2135
Female, age 91, both hemispheres
47593.2
Principal sensory trigeminal nucleus nTPM: 94005.0
2324
Male, age 76, both hemispheres
145432.1
2367
Female, age 91, left hemisphere
109392.9
2008
Male, age 80, left hemisphere
60698.0
2158
Male, age 61, both hemispheres
60497.1
Reticular pontine nucleus, caudal nTPM: 107315.9
2332
Male, age 80, right hemisphere
163567.2
2457
Female, age 91, both hemispheres
127485.1
2559
Male, age 74, both hemispheres
70317.5
2092
Male, age 76, both hemispheres
67893.7
Reticular pontine nucleus, oral nTPM: 73502.8
2366
Female, age 91, both hemispheres
128198.1
2167
Male, age 76, both hemispheres
86262.1
1939
Male, age 80, both hemispheres
56117.8
2012
Female, age 85, both hemispheres
51519.4
2361
Male, age 74, both hemispheres
45416.7
Reticulotegmental nucleus nTPM: 142294.9
2333
Male, age 80, both hemispheres
163492.1
2322
Female, age 91, both hemispheres
163315.6
2452
Male, age 74, both hemispheres
125519.7
2325
Male, age 76, both hemispheres
116852.2
Spinal trigeminal nucleus, oral nTPM: 92245.8
2164
Male, age 80, both hemispheres
139077.1
1978
Male, age 76, both hemispheres
71052.0
2737
Female, age 85, both hemispheres
66608.3
Subcoeruleus area nTPM: 76110.6
2451
Male, age 74, both hemispheres
96043.6
2323
Female, age 91, left hemisphere
84519.8
2089
Male, age 76, left hemisphere
75421.8
1958
Male, age 80, both hemispheres
70006.2
2369
Female, age 85, left hemisphere
54561.5
Superior olive nTPM: 94266.3
2561
Female, age 91, both hemispheres
170928.5
2329
Male, age 80, right hemisphere
144072.2
2020
Male, age 76, both hemispheres
62582.6
1875
Female, age 85, both hemispheres
53010.5
2364
Male, age 74, right hemisphere
40737.5
Ventral periolivary nuclei nTPM: 103214.8
2794
Female, age 91, left hemisphere
160003.7
2165
Male, age 80, both hemispheres
111401.4
2130
Female, age 85, both hemispheres
83353.8
2023
Male, age 76, both hemispheres
58100.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 109702.7
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116970.5
Pig sample
Sample description
nTPM
Pons nTPM: 116970.5
Samples: 4
Max nTPM: 126808.1
Min nTPM: 92096.8
Sample A
Female
125169.1
Sample B
Female
92096.8
Sample C
Male
123808.0
Sample D
Male
126808.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
