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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3923.0
nTPM
Monaco:
18557.5
nTPM
Schmiedel:
18288.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3923.0
HPA sample
nTPM
gdT-cell nTPM: 3090.1
Samples: 6
Max nTPM: 6835.0
Min nTPM: 1675.2
P10809_1007
6835.0
P10809_1022
2383.7
P10809_1041
2578.5
P10809_1060
1675.2
P10809_1077
2345.4
P10809_1098
2722.5
MAIT T-cell nTPM: 3425.9
Samples: 6
Max nTPM: 6487.1
Min nTPM: 2046.7
P10809_1006
6487.1
P10809_1024
3132.3
P10809_1043
2046.7
P10809_1062
2794.0
P10809_1083
3185.8
P10809_1097
2909.6
Memory CD4 T-cell nTPM: 3056.6
Samples: 6
Max nTPM: 5457.2
Min nTPM: 2084.7
P10809_1014
5457.2
P10809_1026
3425.2
P10809_1045
2104.9
P10809_1064
2732.5
P10809_1086
2534.9
P10809_1113
2084.7
Memory CD8 T-cell nTPM: 3424.4
Samples: 5
Max nTPM: 5833.2
Min nTPM: 2254.3
P10809_1012
5833.2
P10809_1027
3701.1
P10809_1046
2317.9
P10809_1065
3015.4
P10809_1111
2254.3
Naive CD4 T-cell nTPM: 3089.6
Samples: 6
Max nTPM: 6450.1
Min nTPM: 1805.9
P10809_1015
6450.1
P10809_1030
3509.2
P10809_1049
2082.5
P10809_1068
2283.0
P10809_1085
2406.9
P10809_1112
1805.9
Naive CD8 T-cell nTPM: 3923.0
Samples: 6
Max nTPM: 8280.3
Min nTPM: 2676.7
P10809_1016
8280.3
P10809_1031
4040.1
P10809_1050
2727.9
P10809_1069
3023.3
P10809_1087
2676.7
P10809_1110
2789.4
T-reg nTPM: 2954.8
Samples: 6
Max nTPM: 5402.0
Min nTPM: 2084.7
P10809_1018
5402.0
P10809_1037
2781.8
P10809_1056
2575.4
P10809_1075
2586.3
P10809_1094
2084.7
P10809_1106
2298.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18557.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10205.0
Samples: 4
Max nTPM: 13392.9
Min nTPM: 7191.0
RHH5202_R3573
9318.7
RHH5230_R3602
10917.5
RHH5259_R3631
7191.0
RHH5288_R3660
13392.9
Effector memory CD8 T-cell nTPM: 14536.6
Samples: 4
Max nTPM: 17016.7
Min nTPM: 10189.9
RHH5203_R3574
17016.7
RHH5231_R3603
16627.8
RHH5260_R3632
10189.9
RHH5289_R3661
14311.8
MAIT T-cell nTPM: 15851.5
Samples: 4
Max nTPM: 18859.2
Min nTPM: 10571.2
RHH5233_R3605
16387.9
RHH5205_R3576
10571.2
RHH5262_R3634
18859.2
RHH5297_R3663
17587.7
Memory CD4 T-cell TFH nTPM: 10930.6
Samples: 4
Max nTPM: 12855.2
Min nTPM: 10113.1
RHH5300_R3666
10113.1
RHH5236_R3608
10438.0
RHH5265_R3637
10315.9
RHH5208_R3579
12855.2
Memory CD4 T-cell Th1 nTPM: 10230.6
Samples: 4
Max nTPM: 13020.6
Min nTPM: 6000.9
RHH5210_R3581
13020.6
RHH5302_R3668
10496.2
RHH5238_R3610
6000.9
RHH5267_R3639
11404.7
Memory CD4 T-cell Th1/Th17 nTPM: 10442.4
Samples: 4
Max nTPM: 13964.8
Min nTPM: 5965.1
RHH5303_R3669
13964.8
RHH5211_R3582
11392.0
RHH5239_R3611
5965.1
RHH5268_R3640
10447.5
Memory CD4 T-cell Th17 nTPM: 10360.1
Samples: 4
Max nTPM: 11713.8
Min nTPM: 8895.3
RHH5304_R3670
11713.8
RHH5212_R3583
10827.4
RHH5240_R3612
8895.3
RHH5269_R3641
10003.8
Memory CD4 T-cell Th2 nTPM: 13448.8
Samples: 4
Max nTPM: 15964.0
Min nTPM: 10953.7
RHH5305_R3671
14241.4
RHH5213_R3584
15964.0
RHH5241_R3613
12636.0
RHH5270_R3642
10953.7
Naive CD4 T-cell nTPM: 11256.5
Samples: 4
Max nTPM: 13104.8
Min nTPM: 10120.5
RHH5306_R3672
10120.5
RHH5214_R3585
13104.8
RHH5242_R3614
10809.2
RHH5271_R3643
10991.5
Naive CD8 T-cell nTPM: 13676.4
Samples: 4
Max nTPM: 21257.5
Min nTPM: 6256.9
RHH5201_R3572
13269.9
RHH5229_R3601
6256.9
RHH5258_R3630
13921.1
RHH5287_R3659
21257.5
Non-Vd2 gdTCR nTPM: 14356.2
Samples: 4
Max nTPM: 14952.5
Min nTPM: 13182.4
RHH5235_R3607
14456.5
RHH5264_R3636
14833.5
RHH5207_R3578
13182.4
RHH5299_R3665
14952.5
T-reg nTPM: 10833.1
Samples: 4
Max nTPM: 12750.7
Min nTPM: 8933.5
RHH5301_R3667
12750.7
RHH5237_R3609
8933.5
RHH5266_R3638
10002.0
RHH5209_R3580
11646.0
Terminal effector memory CD4 T-cell nTPM: 18557.5
Samples: 2
Max nTPM: 22435.4
Min nTPM: 14679.6
RHH5243_R3615
14679.6
RHH5272_R3644
22435.4
Terminal effector memory CD8 T-cell nTPM: 16312.1
Samples: 4
Max nTPM: 21286.7
Min nTPM: 11984.7
RHH5232_R3604
21286.7
RHH5204_R3575
11984.7
RHH5261_R3633
14718.2
RHH5296_R3662
17258.8
Vd2 gdTCR nTPM: 15522.6
Samples: 4
Max nTPM: 16650.8
Min nTPM: 14159.4
RHH5234_R3606
16078.8
RHH5206_R3577
15201.2
RHH5263_R3635
14159.4
RHH5298_R3664
16650.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.