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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
73.1
nTPM
Monaco:
171.0
nTPM
Schmiedel:
115.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.1
HPA sample
nTPM
gdT-cell nTPM: 39.3
Samples: 6
Max nTPM: 49.2
Min nTPM: 29.1
P10809_1007
49.2
P10809_1022
48.1
P10809_1041
40.0
P10809_1060
29.2
P10809_1077
29.1
P10809_1098
40.3
MAIT T-cell nTPM: 73.1
Samples: 6
Max nTPM: 93.8
Min nTPM: 50.1
P10809_1006
93.8
P10809_1024
79.9
P10809_1043
87.9
P10809_1062
62.5
P10809_1083
64.2
P10809_1097
50.1
Memory CD4 T-cell nTPM: 43.5
Samples: 6
Max nTPM: 54.1
Min nTPM: 33.2
P10809_1014
54.1
P10809_1026
43.0
P10809_1045
52.0
P10809_1064
33.2
P10809_1086
41.1
P10809_1113
37.6
Memory CD8 T-cell nTPM: 44.6
Samples: 5
Max nTPM: 57.2
Min nTPM: 27.9
P10809_1012
47.6
P10809_1027
57.2
P10809_1046
51.1
P10809_1065
39.4
P10809_1111
27.9
Naive CD4 T-cell nTPM: 27.3
Samples: 6
Max nTPM: 38.2
Min nTPM: 19.4
P10809_1015
38.2
P10809_1030
26.0
P10809_1049
30.7
P10809_1068
19.4
P10809_1085
26.7
P10809_1112
23.0
Naive CD8 T-cell nTPM: 35.4
Samples: 6
Max nTPM: 42.1
Min nTPM: 24.9
P10809_1016
42.1
P10809_1031
41.2
P10809_1050
37.5
P10809_1069
32.9
P10809_1087
33.9
P10809_1110
24.9
T-reg nTPM: 16.6
Samples: 6
Max nTPM: 22.5
Min nTPM: 9.0
P10809_1018
22.5
P10809_1037
18.0
P10809_1056
20.3
P10809_1075
14.0
P10809_1094
9.0
P10809_1106
15.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 88.7
Min nTPM: 52.0
RHH5202_R3573
77.0
RHH5230_R3602
67.6
RHH5259_R3631
52.0
RHH5288_R3660
88.7
Effector memory CD8 T-cell nTPM: 78.4
Samples: 4
Max nTPM: 116.2
Min nTPM: 52.0
RHH5203_R3574
116.2
RHH5231_R3603
70.7
RHH5260_R3632
52.0
RHH5289_R3661
74.7
MAIT T-cell nTPM: 171.1
Samples: 4
Max nTPM: 185.1
Min nTPM: 162.8
RHH5233_R3605
167.3
RHH5205_R3576
162.8
RHH5262_R3634
185.1
RHH5297_R3663
169.0
Memory CD4 T-cell TFH nTPM: 65.2
Samples: 4
Max nTPM: 80.0
Min nTPM: 57.8
RHH5300_R3666
80.0
RHH5236_R3608
57.8
RHH5265_R3637
61.3
RHH5208_R3579
61.5
Memory CD4 T-cell Th1 nTPM: 72.6
Samples: 4
Max nTPM: 109.2
Min nTPM: 40.1
RHH5210_R3581
69.3
RHH5302_R3668
109.2
RHH5238_R3610
40.1
RHH5267_R3639
71.7
Memory CD4 T-cell Th1/Th17 nTPM: 99.6
Samples: 4
Max nTPM: 144.9
Min nTPM: 45.2
RHH5303_R3669
144.9
RHH5211_R3582
121.0
RHH5239_R3611
45.2
RHH5268_R3640
87.3
Memory CD4 T-cell Th17 nTPM: 104.0
Samples: 4
Max nTPM: 142.9
Min nTPM: 78.2
RHH5304_R3670
142.9
RHH5212_R3583
108.4
RHH5240_R3612
78.2
RHH5269_R3641
86.3
Memory CD4 T-cell Th2 nTPM: 89.2
Samples: 4
Max nTPM: 94.4
Min nTPM: 85.7
RHH5305_R3671
85.7
RHH5213_R3584
88.8
RHH5241_R3613
94.4
RHH5270_R3642
87.9
Naive CD4 T-cell nTPM: 45.6
Samples: 4
Max nTPM: 60.5
Min nTPM: 29.2
RHH5306_R3672
51.8
RHH5214_R3585
60.5
RHH5242_R3614
29.2
RHH5271_R3643
40.8
Naive CD8 T-cell nTPM: 43.4
Samples: 4
Max nTPM: 66.2
Min nTPM: 19.2
RHH5201_R3572
44.2
RHH5229_R3601
19.2
RHH5258_R3630
66.2
RHH5287_R3659
43.9
Non-Vd2 gdTCR nTPM: 73.6
Samples: 4
Max nTPM: 89.2
Min nTPM: 62.4
RHH5235_R3607
62.4
RHH5264_R3636
62.5
RHH5207_R3578
89.2
RHH5299_R3665
80.4
T-reg nTPM: 61.1
Samples: 4
Max nTPM: 69.7
Min nTPM: 45.9
RHH5301_R3667
69.2
RHH5237_R3609
59.7
RHH5266_R3638
69.7
RHH5209_R3580
45.9
Terminal effector memory CD4 T-cell nTPM: 79.5
Samples: 2
Max nTPM: 108.5
Min nTPM: 50.5
RHH5243_R3615
50.5
RHH5272_R3644
108.5
Terminal effector memory CD8 T-cell nTPM: 74.5
Samples: 4
Max nTPM: 92.9
Min nTPM: 64.6
RHH5232_R3604
64.6
RHH5204_R3575
75.7
RHH5261_R3633
64.6
RHH5296_R3662
92.9
Vd2 gdTCR nTPM: 109.1
Samples: 4
Max nTPM: 128.6
Min nTPM: 89.2
RHH5234_R3606
99.1
RHH5206_R3577
128.6
RHH5263_R3635
89.2
RHH5298_R3664
119.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
