HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:109.8 nTPM
HPA Brain:110.6 nTPM
GTEx:109.8 nTPM
FANTOM5:77.9 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:24.1 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030887
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.6
Sample id Sample description nTPM
Hippocampus
nTPM: 110.6
2621 Female, age 67, right hemisphere 136.2
2529 Female, age 94, left hemisphere 133.1
2148 Female, age 91, left hemisphere 115.9
1911 Female, age 85, right hemisphere 98.5
1855 Male, age 76, left hemisphere 92.7
1898 Male, age 80, left hemisphere 87.6
Dentate gyrus
nTPM: 100.6
2531 Female, age 67, both hemispheres 150.7
2530 Female, age 94, left hemisphere 104.3
1927 Female, age 91, both hemispheres 96.1
2528 Male, age 74, both hemispheres 93.2
2010 Male, age 76, both hemispheres 79.7
2246 Female, age 85, both hemispheres 79.6
Entorhinal gyrus
nTPM: 105.2
2686 Male, age 75, right hemisphere 122.9
2117 Female, age 91, right hemisphere 113.8
2764 Male, age 80, right hemisphere 105.9
2613 Female, age 94, left hemisphere 98.9
1787 Male, age 76, left hemisphere 95.6
1938 Female, age 85, left hemisphere 94.3
Hippocampus, CA1
nTPM: 84.7
2527 Male, age 74, both hemispheres 95.5
2045 Male, age 76, both hemispheres 86.7
1873 Female, age 85, both hemispheres 82.9
2082 Female, age 91, right hemisphere 81.9
2749 Male, age 80, left hemisphere 76.2
Hippocampus, CA2
nTPM: 92.7
1963 Male, age 80, left hemisphere 140.3
2113 Female, age 91, right hemisphere 97.1
2437 Female, age 94, left hemisphere 91.8
1940 Female, age 85, left hemisphere 79.5
1892 Male, age 76, both hemispheres 78.8
2249 Male, age 74, both hemispheres 68.9
Hippocampus, CA3
nTPM: 99.8
2861 Female, age 67, both hemispheres 156.7
2620 Female, age 94, left hemisphere 116.6
2137 Male, age 80, left hemisphere 95.4
1867 Male, age 76, both hemispheres 87.3
1891 Female, age 85, both hemispheres 77.6
2436 Male, age 74, both hemispheres 65.4
Parahippocampal cortex
nTPM: 98.7
2622 Female, age 67, right hemisphere 127.7
2245 Female, age 91, both hemispheres 125.1
2532 Female, age 72, left hemisphere 113.3
2250 Female, age 67, right hemisphere 94.2
2018 Male, age 76, both hemispheres 93.0
2692 Male, age 74, both hemispheres 91.0
1990 Female, age 91, right hemisphere 88.7
1933 Female, age 85, both hemispheres 88.6
2693 Female, age 94, both hemispheres 87.2
1850 Male, age 80, both hemispheres 78.4
Perirhinal gyrus
nTPM: 95.3
2848 Male, age 76, right hemisphere 114.4
1794 Male, age 80, right hemisphere 102.1
1841 Female, age 85, right hemisphere 97.1
2521 Female, age 94, right hemisphere 87.0
1847 Female, age 91, left hemisphere 75.7
Subiculum
nTPM: 87.7
2619 Male, age 74, both hemispheres 97.4
1977 Female, age 85, both hemispheres 96.3
2729 Female, age 91, right hemisphere 92.1
2438 Female, age 94, left hemisphere 86.4
2042 Male, age 76, both hemispheres 81.7
1901 Male, age 80, both hemispheres 72.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.8
Samples: 197

Max nTPM: 359.2
Min nTPM: 27.9
Std nTPM: 45.7
Median nTPM: 99.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 359.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 319.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 262.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 233.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 215.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 208.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 203.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 202.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 199.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 199.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 196.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.9
FF:10153-102I9 76 years, female 114.4
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.9
Pig sample Sample description nTPM
Subiculum
nTPM: 47.2
Samples: 4

Max nTPM: 62.3
Min nTPM: 38.5
Sample A Female 62.3
Sample B Female 43.9
Sample C Male 43.9
Sample D Male 38.5
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 65.0
Min nTPM: 36.8
Sample A Female 53.8
Sample B Female 42.4
Sample C Male 65.0
Sample D Male 36.8
Entorhinal cortex
nTPM: 53.9
Samples: 4

Max nTPM: 63.4
Min nTPM: 49.2
Sample A Female 52.7
Sample B Female 49.2
Sample C Male 63.4
Sample D Male 50.3
Ventral hippocampus
nTPM: 45.3
Samples: 4

Max nTPM: 57.9
Min nTPM: 36.1
Sample A Female 36.8
Sample B Female 36.1
Sample C Male 57.9
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 26.9
Sample C Female 23.7
Sample D Female 23.4
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.9
Sample A Male 20.2
Sample B Male 20.6
Sample C Female 16.9
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
2744 Antisense, RP_Baylor_103341, Mouse strain C57BL/6J (56 days, male) 10.4
2743 Antisense, RP_Baylor_103341, Mouse strain C57BL/6J (56 days, male) 3.0

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