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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.6
nTPM
Monaco:
66.4
nTPM
Schmiedel:
37.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.6
HPA sample
nTPM
gdT-cell nTPM: 62.2
Samples: 6
Max nTPM: 73.1
Min nTPM: 46.8
P10809_1007
50.3
P10809_1022
70.4
P10809_1041
70.4
P10809_1060
46.8
P10809_1077
73.1
P10809_1098
62.4
MAIT T-cell nTPM: 38.8
Samples: 6
Max nTPM: 61.5
Min nTPM: 24.7
P10809_1006
24.7
P10809_1024
61.5
P10809_1043
29.3
P10809_1062
31.1
P10809_1083
47.2
P10809_1097
38.8
Memory CD4 T-cell nTPM: 47.4
Samples: 6
Max nTPM: 68.7
Min nTPM: 30.1
P10809_1014
30.1
P10809_1026
53.3
P10809_1045
43.6
P10809_1064
42.8
P10809_1086
68.7
P10809_1113
45.9
Memory CD8 T-cell nTPM: 52.3
Samples: 5
Max nTPM: 69.4
Min nTPM: 26.1
P10809_1012
26.1
P10809_1027
69.4
P10809_1046
55.9
P10809_1065
53.8
P10809_1111
56.4
Naive CD4 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 62.0
Min nTPM: 36.5
P10809_1015
36.5
P10809_1030
58.1
P10809_1049
55.5
P10809_1068
44.5
P10809_1085
62.0
P10809_1112
46.0
Naive CD8 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 81.5
Min nTPM: 34.7
P10809_1016
34.7
P10809_1031
43.8
P10809_1050
46.0
P10809_1069
61.3
P10809_1087
81.5
P10809_1110
43.6
T-reg nTPM: 79.6
Samples: 6
Max nTPM: 107.9
Min nTPM: 45.5
P10809_1018
45.5
P10809_1037
104.4
P10809_1056
50.5
P10809_1075
76.3
P10809_1094
107.9
P10809_1106
93.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.4
Samples: 4
Max nTPM: 63.2
Min nTPM: 18.6
RHH5202_R3573
59.3
RHH5230_R3602
18.6
RHH5259_R3631
24.3
RHH5288_R3660
63.2
Effector memory CD8 T-cell nTPM: 46.7
Samples: 4
Max nTPM: 69.3
Min nTPM: 31.8
RHH5203_R3574
69.3
RHH5231_R3603
31.8
RHH5260_R3632
33.9
RHH5289_R3661
51.7
MAIT T-cell nTPM: 46.0
Samples: 4
Max nTPM: 63.6
Min nTPM: 33.3
RHH5233_R3605
37.6
RHH5205_R3576
33.3
RHH5262_R3634
49.5
RHH5297_R3663
63.6
Memory CD4 T-cell TFH nTPM: 47.2
Samples: 4
Max nTPM: 56.6
Min nTPM: 30.5
RHH5300_R3666
51.4
RHH5236_R3608
50.1
RHH5265_R3637
30.5
RHH5208_R3579
56.6
Memory CD4 T-cell Th1 nTPM: 46.1
Samples: 4
Max nTPM: 83.0
Min nTPM: 19.9
RHH5210_R3581
48.4
RHH5302_R3668
83.0
RHH5238_R3610
19.9
RHH5267_R3639
33.0
Memory CD4 T-cell Th1/Th17 nTPM: 46.3
Samples: 4
Max nTPM: 72.3
Min nTPM: 16.1
RHH5303_R3669
56.3
RHH5211_R3582
72.3
RHH5239_R3611
16.1
RHH5268_R3640
40.3
Memory CD4 T-cell Th17 nTPM: 28.6
Samples: 4
Max nTPM: 43.1
Min nTPM: 17.1
RHH5304_R3670
32.8
RHH5212_R3583
43.1
RHH5240_R3612
17.1
RHH5269_R3641
21.2
Memory CD4 T-cell Th2 nTPM: 40.5
Samples: 4
Max nTPM: 50.9
Min nTPM: 30.6
RHH5305_R3671
43.5
RHH5213_R3584
36.8
RHH5241_R3613
50.9
RHH5270_R3642
30.6
Naive CD4 T-cell nTPM: 53.5
Samples: 4
Max nTPM: 67.5
Min nTPM: 34.4
RHH5306_R3672
61.0
RHH5214_R3585
67.5
RHH5242_R3614
50.9
RHH5271_R3643
34.4
Naive CD8 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 60.2
Min nTPM: 30.1
RHH5201_R3572
60.2
RHH5229_R3601
30.1
RHH5258_R3630
48.3
RHH5287_R3659
55.4
Non-Vd2 gdTCR nTPM: 58.7
Samples: 4
Max nTPM: 89.5
Min nTPM: 30.8
RHH5235_R3607
30.8
RHH5264_R3636
52.6
RHH5207_R3578
61.8
RHH5299_R3665
89.5
T-reg nTPM: 52.5
Samples: 4
Max nTPM: 66.1
Min nTPM: 36.1
RHH5301_R3667
66.1
RHH5237_R3609
60.3
RHH5266_R3638
36.1
RHH5209_R3580
47.4
Terminal effector memory CD4 T-cell nTPM: 37.9
Samples: 2
Max nTPM: 62.4
Min nTPM: 13.4
RHH5243_R3615
13.4
RHH5272_R3644
62.4
Terminal effector memory CD8 T-cell nTPM: 66.4
Samples: 4
Max nTPM: 100.3
Min nTPM: 36.2
RHH5232_R3604
36.2
RHH5204_R3575
100.3
RHH5261_R3633
44.9
RHH5296_R3662
84.2
Vd2 gdTCR nTPM: 56.9
Samples: 4
Max nTPM: 78.7
Min nTPM: 36.5
RHH5234_R3606
39.4
RHH5206_R3577
73.1
RHH5263_R3635
36.5
RHH5298_R3664
78.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
