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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
233.8
nTPM
Monaco:
28.9
nTPM
Schmiedel:
19.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
233.8
HPA sample
nTPM
gdT-cell nTPM: 105.6
Samples: 6
Max nTPM: 149.7
Min nTPM: 57.2
P10809_1007
57.2
P10809_1022
149.7
P10809_1041
104.4
P10809_1060
87.2
P10809_1077
85.5
P10809_1098
149.6
MAIT T-cell nTPM: 138.2
Samples: 6
Max nTPM: 185.6
Min nTPM: 74.9
P10809_1006
74.9
P10809_1024
185.6
P10809_1043
128.8
P10809_1062
142.7
P10809_1083
132.7
P10809_1097
164.4
Memory CD4 T-cell nTPM: 175.1
Samples: 6
Max nTPM: 250.3
Min nTPM: 115.4
P10809_1014
115.4
P10809_1026
250.3
P10809_1045
175.6
P10809_1064
164.1
P10809_1086
154.7
P10809_1113
190.7
Memory CD8 T-cell nTPM: 127.1
Samples: 5
Max nTPM: 157.3
Min nTPM: 95.7
P10809_1012
95.7
P10809_1027
140.7
P10809_1046
157.3
P10809_1065
104.6
P10809_1111
137.2
Naive CD4 T-cell nTPM: 233.9
Samples: 6
Max nTPM: 374.1
Min nTPM: 113.3
P10809_1015
113.3
P10809_1030
292.8
P10809_1049
374.1
P10809_1068
208.2
P10809_1085
186.4
P10809_1112
228.3
Naive CD8 T-cell nTPM: 138.3
Samples: 6
Max nTPM: 189.1
Min nTPM: 89.0
P10809_1016
124.8
P10809_1031
189.1
P10809_1050
143.8
P10809_1069
120.5
P10809_1087
89.0
P10809_1110
162.3
T-reg nTPM: 179.5
Samples: 6
Max nTPM: 272.2
Min nTPM: 97.0
P10809_1018
97.0
P10809_1037
164.6
P10809_1056
272.2
P10809_1075
202.3
P10809_1094
171.7
P10809_1106
169.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 24.1
Min nTPM: 11.3
RHH5202_R3573
11.3
RHH5230_R3602
20.0
RHH5259_R3631
15.1
RHH5288_R3660
24.1
Effector memory CD8 T-cell nTPM: 7.4
Samples: 4
Max nTPM: 8.5
Min nTPM: 5.5
RHH5203_R3574
8.5
RHH5231_R3603
5.5
RHH5260_R3632
7.5
RHH5289_R3661
8.1
MAIT T-cell nTPM: 14.0
Samples: 4
Max nTPM: 17.9
Min nTPM: 9.9
RHH5233_R3605
17.9
RHH5205_R3576
13.5
RHH5262_R3634
9.9
RHH5297_R3663
14.7
Memory CD4 T-cell TFH nTPM: 28.9
Samples: 4
Max nTPM: 69.5
Min nTPM: 11.5
RHH5300_R3666
14.9
RHH5236_R3608
69.5
RHH5265_R3637
11.5
RHH5208_R3579
19.8
Memory CD4 T-cell Th1 nTPM: 22.2
Samples: 4
Max nTPM: 32.9
Min nTPM: 11.8
RHH5210_R3581
11.8
RHH5302_R3668
32.9
RHH5238_R3610
29.2
RHH5267_R3639
14.7
Memory CD4 T-cell Th1/Th17 nTPM: 17.7
Samples: 4
Max nTPM: 27.1
Min nTPM: 13.0
RHH5303_R3669
27.1
RHH5211_R3582
13.0
RHH5239_R3611
13.8
RHH5268_R3640
16.8
Memory CD4 T-cell Th17 nTPM: 15.4
Samples: 4
Max nTPM: 20.6
Min nTPM: 11.1
RHH5304_R3670
12.8
RHH5212_R3583
20.6
RHH5240_R3612
17.0
RHH5269_R3641
11.1
Memory CD4 T-cell Th2 nTPM: 20.7
Samples: 4
Max nTPM: 23.3
Min nTPM: 15.2
RHH5305_R3671
23.3
RHH5213_R3584
22.4
RHH5241_R3613
21.8
RHH5270_R3642
15.2
Naive CD4 T-cell nTPM: 21.4
Samples: 4
Max nTPM: 42.1
Min nTPM: 7.8
RHH5306_R3672
18.8
RHH5214_R3585
42.1
RHH5242_R3614
17.0
RHH5271_R3643
7.8
Naive CD8 T-cell nTPM: 21.4
Samples: 4
Max nTPM: 33.2
Min nTPM: 14.3
RHH5201_R3572
18.9
RHH5229_R3601
19.1
RHH5258_R3630
33.2
RHH5287_R3659
14.3
Non-Vd2 gdTCR nTPM: 10.0
Samples: 4
Max nTPM: 12.4
Min nTPM: 8.2
RHH5235_R3607
9.5
RHH5264_R3636
8.2
RHH5207_R3578
9.9
RHH5299_R3665
12.4
T-reg nTPM: 23.2
Samples: 4
Max nTPM: 29.2
Min nTPM: 13.0
RHH5301_R3667
23.5
RHH5237_R3609
29.2
RHH5266_R3638
13.0
RHH5209_R3580
27.0
Terminal effector memory CD4 T-cell nTPM: 6.8
Samples: 2
Max nTPM: 8.3
Min nTPM: 5.3
RHH5243_R3615
5.3
RHH5272_R3644
8.3
Terminal effector memory CD8 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 16.5
Min nTPM: 1.8
RHH5232_R3604
1.8
RHH5204_R3575
16.5
RHH5261_R3633
10.1
RHH5296_R3662
9.8
Vd2 gdTCR nTPM: 16.7
Samples: 4
Max nTPM: 24.8
Min nTPM: 11.4
RHH5234_R3606
16.2
RHH5206_R3577
11.4
RHH5263_R3635
14.2
RHH5298_R3664
24.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
