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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
772.3
nTPM
Monaco:
362.0
nTPM
Schmiedel:
15125.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
772.3
HPA sample
nTPM
gdT-cell nTPM: 337.5
Samples: 6
Max nTPM: 1255.5
Min nTPM: 99.1
P10809_1007
1255.5
P10809_1022
99.1
P10809_1041
129.3
P10809_1060
124.3
P10809_1077
207.7
P10809_1098
209.0
MAIT T-cell nTPM: 443.1
Samples: 6
Max nTPM: 1401.7
Min nTPM: 125.4
P10809_1006
1401.7
P10809_1024
220.4
P10809_1043
125.4
P10809_1062
273.1
P10809_1083
354.8
P10809_1097
283.0
Memory CD4 T-cell nTPM: 394.7
Samples: 6
Max nTPM: 1408.7
Min nTPM: 96.5
P10809_1014
1408.7
P10809_1026
240.7
P10809_1045
96.5
P10809_1064
196.8
P10809_1086
225.5
P10809_1113
200.0
Memory CD8 T-cell nTPM: 417.5
Samples: 5
Max nTPM: 1198.3
Min nTPM: 122.6
P10809_1012
1198.3
P10809_1027
345.1
P10809_1046
122.6
P10809_1065
259.9
P10809_1111
161.4
Naive CD4 T-cell nTPM: 570.8
Samples: 6
Max nTPM: 2291.0
Min nTPM: 66.8
P10809_1015
2291.0
P10809_1030
352.8
P10809_1049
66.8
P10809_1068
279.9
P10809_1085
241.1
P10809_1112
193.0
Naive CD8 T-cell nTPM: 772.3
Samples: 6
Max nTPM: 3323.3
Min nTPM: 160.8
P10809_1016
3323.3
P10809_1031
368.8
P10809_1050
160.8
P10809_1069
291.5
P10809_1087
218.1
P10809_1110
271.5
T-reg nTPM: 263.2
Samples: 6
Max nTPM: 907.8
Min nTPM: 83.9
P10809_1018
907.8
P10809_1037
171.3
P10809_1056
83.9
P10809_1075
157.3
P10809_1094
107.0
P10809_1106
151.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
362.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 199.9
Samples: 4
Max nTPM: 309.2
Min nTPM: 106.2
RHH5202_R3573
106.2
RHH5230_R3602
235.2
RHH5259_R3631
309.2
RHH5288_R3660
149.0
Effector memory CD8 T-cell nTPM: 152.0
Samples: 4
Max nTPM: 259.5
Min nTPM: 72.2
RHH5203_R3574
72.2
RHH5231_R3603
117.1
RHH5260_R3632
259.5
RHH5289_R3661
159.3
MAIT T-cell nTPM: 217.7
Samples: 4
Max nTPM: 299.1
Min nTPM: 124.8
RHH5233_R3605
124.8
RHH5205_R3576
251.2
RHH5262_R3634
299.1
RHH5297_R3663
195.7
Memory CD4 T-cell TFH nTPM: 107.6
Samples: 4
Max nTPM: 143.2
Min nTPM: 78.8
RHH5300_R3666
143.2
RHH5236_R3608
121.9
RHH5265_R3637
86.6
RHH5208_R3579
78.8
Memory CD4 T-cell Th1 nTPM: 245.1
Samples: 4
Max nTPM: 442.9
Min nTPM: 87.8
RHH5210_R3581
87.8
RHH5302_R3668
158.1
RHH5238_R3610
442.9
RHH5267_R3639
291.4
Memory CD4 T-cell Th1/Th17 nTPM: 226.5
Samples: 4
Max nTPM: 351.5
Min nTPM: 69.2
RHH5303_R3669
138.7
RHH5211_R3582
69.2
RHH5239_R3611
346.5
RHH5268_R3640
351.5
Memory CD4 T-cell Th17 nTPM: 230.5
Samples: 4
Max nTPM: 380.8
Min nTPM: 90.3
RHH5304_R3670
380.8
RHH5212_R3583
90.3
RHH5240_R3612
234.5
RHH5269_R3641
216.5
Memory CD4 T-cell Th2 nTPM: 230.2
Samples: 4
Max nTPM: 421.4
Min nTPM: 147.3
RHH5305_R3671
421.4
RHH5213_R3584
151.2
RHH5241_R3613
147.3
RHH5270_R3642
200.8
Naive CD4 T-cell nTPM: 277.9
Samples: 4
Max nTPM: 377.4
Min nTPM: 174.7
RHH5306_R3672
377.4
RHH5214_R3585
266.2
RHH5242_R3614
174.7
RHH5271_R3643
293.4
Naive CD8 T-cell nTPM: 362.0
Samples: 4
Max nTPM: 644.6
Min nTPM: 107.5
RHH5201_R3572
151.4
RHH5229_R3601
544.5
RHH5258_R3630
107.5
RHH5287_R3659
644.6
Non-Vd2 gdTCR nTPM: 159.1
Samples: 4
Max nTPM: 274.7
Min nTPM: 84.5
RHH5235_R3607
274.7
RHH5264_R3636
84.5
RHH5207_R3578
116.4
RHH5299_R3665
160.6
T-reg nTPM: 182.2
Samples: 4
Max nTPM: 273.7
Min nTPM: 128.8
RHH5301_R3667
163.2
RHH5237_R3609
128.8
RHH5266_R3638
273.7
RHH5209_R3580
163.1
Terminal effector memory CD4 T-cell nTPM: 225.5
Samples: 2
Max nTPM: 307.1
Min nTPM: 143.8
RHH5243_R3615
307.1
RHH5272_R3644
143.8
Terminal effector memory CD8 T-cell nTPM: 175.1
Samples: 4
Max nTPM: 346.5
Min nTPM: 102.5
RHH5232_R3604
102.5
RHH5204_R3575
127.0
RHH5261_R3633
346.5
RHH5296_R3662
124.3
Vd2 gdTCR nTPM: 283.7
Samples: 4
Max nTPM: 398.4
Min nTPM: 180.1
RHH5234_R3606
198.3
RHH5206_R3577
357.8
RHH5263_R3635
398.4
RHH5298_R3664
180.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
