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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
156.3
nTPM
Monaco:
461.6
nTPM
Schmiedel:
131.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.3
HPA sample
nTPM
gdT-cell nTPM: 141.9
Samples: 6
Max nTPM: 178.2
Min nTPM: 117.8
P10809_1007
125.5
P10809_1022
178.2
P10809_1041
153.8
P10809_1060
129.1
P10809_1077
146.9
P10809_1098
117.8
MAIT T-cell nTPM: 156.3
Samples: 6
Max nTPM: 203.6
Min nTPM: 119.8
P10809_1006
119.8
P10809_1024
203.6
P10809_1043
136.6
P10809_1062
173.2
P10809_1083
138.6
P10809_1097
166.1
Memory CD4 T-cell nTPM: 117.0
Samples: 6
Max nTPM: 145.3
Min nTPM: 96.8
P10809_1014
106.5
P10809_1026
96.8
P10809_1045
123.1
P10809_1064
129.9
P10809_1086
145.3
P10809_1113
100.5
Memory CD8 T-cell nTPM: 133.0
Samples: 5
Max nTPM: 161.5
Min nTPM: 109.8
P10809_1012
109.8
P10809_1027
123.5
P10809_1046
136.1
P10809_1065
161.5
P10809_1111
134.1
Naive CD4 T-cell nTPM: 92.4
Samples: 6
Max nTPM: 115.0
Min nTPM: 76.5
P10809_1015
79.5
P10809_1030
89.2
P10809_1049
92.5
P10809_1068
101.6
P10809_1085
115.0
P10809_1112
76.5
Naive CD8 T-cell nTPM: 117.3
Samples: 6
Max nTPM: 172.4
Min nTPM: 76.0
P10809_1016
76.0
P10809_1031
125.1
P10809_1050
117.5
P10809_1069
134.9
P10809_1087
172.4
P10809_1110
77.6
T-reg nTPM: 140.1
Samples: 6
Max nTPM: 184.0
Min nTPM: 106.5
P10809_1018
122.5
P10809_1037
184.0
P10809_1056
133.7
P10809_1075
106.5
P10809_1094
145.9
P10809_1106
148.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
461.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 263.8
Samples: 4
Max nTPM: 401.3
Min nTPM: 166.6
RHH5202_R3573
401.3
RHH5230_R3602
221.3
RHH5259_R3631
166.6
RHH5288_R3660
266.0
Effector memory CD8 T-cell nTPM: 441.4
Samples: 4
Max nTPM: 585.0
Min nTPM: 293.4
RHH5203_R3574
585.0
RHH5231_R3603
434.5
RHH5260_R3632
293.4
RHH5289_R3661
452.6
MAIT T-cell nTPM: 441.5
Samples: 4
Max nTPM: 506.6
Min nTPM: 357.1
RHH5233_R3605
506.6
RHH5205_R3576
430.3
RHH5262_R3634
472.1
RHH5297_R3663
357.1
Memory CD4 T-cell TFH nTPM: 312.6
Samples: 4
Max nTPM: 424.0
Min nTPM: 235.5
RHH5300_R3666
235.5
RHH5236_R3608
321.0
RHH5265_R3637
269.9
RHH5208_R3579
424.0
Memory CD4 T-cell Th1 nTPM: 254.6
Samples: 4
Max nTPM: 301.2
Min nTPM: 218.5
RHH5210_R3581
301.2
RHH5302_R3668
275.3
RHH5238_R3610
223.5
RHH5267_R3639
218.5
Memory CD4 T-cell Th1/Th17 nTPM: 335.4
Samples: 4
Max nTPM: 434.1
Min nTPM: 227.5
RHH5303_R3669
415.3
RHH5211_R3582
434.1
RHH5239_R3611
227.5
RHH5268_R3640
264.7
Memory CD4 T-cell Th17 nTPM: 317.6
Samples: 4
Max nTPM: 370.7
Min nTPM: 279.3
RHH5304_R3670
340.8
RHH5212_R3583
370.7
RHH5240_R3612
279.3
RHH5269_R3641
279.7
Memory CD4 T-cell Th2 nTPM: 326.7
Samples: 4
Max nTPM: 375.0
Min nTPM: 284.3
RHH5305_R3671
289.7
RHH5213_R3584
375.0
RHH5241_R3613
357.8
RHH5270_R3642
284.3
Naive CD4 T-cell nTPM: 228.6
Samples: 4
Max nTPM: 250.2
Min nTPM: 209.0
RHH5306_R3672
244.5
RHH5214_R3585
250.2
RHH5242_R3614
209.0
RHH5271_R3643
210.6
Naive CD8 T-cell nTPM: 212.6
Samples: 4
Max nTPM: 324.0
Min nTPM: 126.1
RHH5201_R3572
324.0
RHH5229_R3601
126.1
RHH5258_R3630
213.2
RHH5287_R3659
186.9
Non-Vd2 gdTCR nTPM: 444.1
Samples: 4
Max nTPM: 649.4
Min nTPM: 296.2
RHH5235_R3607
296.2
RHH5264_R3636
469.6
RHH5207_R3578
649.4
RHH5299_R3665
361.1
T-reg nTPM: 285.7
Samples: 4
Max nTPM: 368.0
Min nTPM: 235.1
RHH5301_R3667
251.6
RHH5237_R3609
368.0
RHH5266_R3638
235.1
RHH5209_R3580
288.0
Terminal effector memory CD4 T-cell nTPM: 352.4
Samples: 2
Max nTPM: 388.3
Min nTPM: 316.4
RHH5243_R3615
316.4
RHH5272_R3644
388.3
Terminal effector memory CD8 T-cell nTPM: 461.6
Samples: 4
Max nTPM: 520.6
Min nTPM: 355.6
RHH5232_R3604
499.3
RHH5204_R3575
520.6
RHH5261_R3633
355.6
RHH5296_R3662
470.7
Vd2 gdTCR nTPM: 418.6
Samples: 4
Max nTPM: 588.8
Min nTPM: 324.2
RHH5234_R3606
393.5
RHH5206_R3577
588.8
RHH5263_R3635
324.2
RHH5298_R3664
367.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.