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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
502.8
nTPM
Monaco:
1110.1
nTPM
Schmiedel:
1080.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
502.8
HPA sample
nTPM
gdT-cell nTPM: 491.6
Samples: 6
Max nTPM: 620.1
Min nTPM: 404.9
P10809_1007
443.9
P10809_1022
497.3
P10809_1041
513.1
P10809_1060
404.9
P10809_1077
470.3
P10809_1098
620.1
MAIT T-cell nTPM: 421.5
Samples: 6
Max nTPM: 532.9
Min nTPM: 369.4
P10809_1006
369.4
P10809_1024
437.8
P10809_1043
384.2
P10809_1062
374.9
P10809_1083
430.0
P10809_1097
532.9
Memory CD4 T-cell nTPM: 415.6
Samples: 6
Max nTPM: 489.7
Min nTPM: 320.6
P10809_1014
392.8
P10809_1026
390.1
P10809_1045
448.3
P10809_1064
452.0
P10809_1086
489.7
P10809_1113
320.6
Memory CD8 T-cell nTPM: 463.4
Samples: 5
Max nTPM: 552.5
Min nTPM: 395.2
P10809_1012
395.2
P10809_1027
418.1
P10809_1046
452.0
P10809_1065
552.5
P10809_1111
499.0
Naive CD4 T-cell nTPM: 493.3
Samples: 6
Max nTPM: 657.1
Min nTPM: 400.3
P10809_1015
400.3
P10809_1030
421.4
P10809_1049
616.5
P10809_1068
443.5
P10809_1085
657.1
P10809_1112
421.0
Naive CD8 T-cell nTPM: 502.8
Samples: 6
Max nTPM: 633.6
Min nTPM: 403.0
P10809_1016
453.1
P10809_1031
490.8
P10809_1050
456.5
P10809_1069
579.9
P10809_1087
633.6
P10809_1110
403.0
T-reg nTPM: 427.4
Samples: 6
Max nTPM: 628.0
Min nTPM: 305.1
P10809_1018
467.0
P10809_1037
354.7
P10809_1056
628.0
P10809_1075
341.4
P10809_1094
468.2
P10809_1106
305.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1110.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 886.1
Samples: 4
Max nTPM: 1175.3
Min nTPM: 507.4
RHH5202_R3573
1175.3
RHH5230_R3602
874.6
RHH5259_R3631
507.4
RHH5288_R3660
986.9
Effector memory CD8 T-cell nTPM: 987.4
Samples: 4
Max nTPM: 1238.4
Min nTPM: 735.7
RHH5203_R3574
1238.4
RHH5231_R3603
1229.9
RHH5260_R3632
745.5
RHH5289_R3661
735.7
MAIT T-cell nTPM: 993.9
Samples: 4
Max nTPM: 1214.8
Min nTPM: 766.5
RHH5233_R3605
1214.8
RHH5205_R3576
766.5
RHH5262_R3634
1091.0
RHH5297_R3663
903.1
Memory CD4 T-cell TFH nTPM: 972.9
Samples: 4
Max nTPM: 1240.4
Min nTPM: 809.7
RHH5300_R3666
809.7
RHH5236_R3608
938.3
RHH5265_R3637
903.0
RHH5208_R3579
1240.4
Memory CD4 T-cell Th1 nTPM: 777.5
Samples: 4
Max nTPM: 946.2
Min nTPM: 554.4
RHH5210_R3581
946.2
RHH5302_R3668
945.7
RHH5238_R3610
554.4
RHH5267_R3639
663.7
Memory CD4 T-cell Th1/Th17 nTPM: 841.0
Samples: 4
Max nTPM: 1067.1
Min nTPM: 485.2
RHH5303_R3669
1067.1
RHH5211_R3582
1059.2
RHH5239_R3611
485.2
RHH5268_R3640
752.6
Memory CD4 T-cell Th17 nTPM: 749.4
Samples: 4
Max nTPM: 931.7
Min nTPM: 629.9
RHH5304_R3670
740.1
RHH5212_R3583
931.7
RHH5240_R3612
695.8
RHH5269_R3641
629.9
Memory CD4 T-cell Th2 nTPM: 846.7
Samples: 4
Max nTPM: 981.4
Min nTPM: 786.5
RHH5305_R3671
786.5
RHH5213_R3584
813.9
RHH5241_R3613
981.4
RHH5270_R3642
805.1
Naive CD4 T-cell nTPM: 897.9
Samples: 4
Max nTPM: 994.1
Min nTPM: 820.1
RHH5306_R3672
951.2
RHH5214_R3585
820.1
RHH5242_R3614
994.1
RHH5271_R3643
826.2
Naive CD8 T-cell nTPM: 915.0
Samples: 4
Max nTPM: 1168.1
Min nTPM: 485.8
RHH5201_R3572
1168.1
RHH5229_R3601
485.8
RHH5258_R3630
1100.1
RHH5287_R3659
905.8
Non-Vd2 gdTCR nTPM: 969.8
Samples: 4
Max nTPM: 1212.5
Min nTPM: 661.5
RHH5235_R3607
661.5
RHH5264_R3636
1212.5
RHH5207_R3578
1164.7
RHH5299_R3665
840.4
T-reg nTPM: 746.1
Samples: 4
Max nTPM: 919.5
Min nTPM: 557.8
RHH5301_R3667
919.5
RHH5237_R3609
868.1
RHH5266_R3638
639.1
RHH5209_R3580
557.8
Terminal effector memory CD4 T-cell nTPM: 944.8
Samples: 2
Max nTPM: 1166.9
Min nTPM: 722.7
RHH5243_R3615
722.7
RHH5272_R3644
1166.9
Terminal effector memory CD8 T-cell nTPM: 1053.5
Samples: 4
Max nTPM: 1256.0
Min nTPM: 752.7
RHH5232_R3604
1256.0
RHH5204_R3575
1080.1
RHH5261_R3633
752.7
RHH5296_R3662
1125.0
Vd2 gdTCR nTPM: 1110.1
Samples: 4
Max nTPM: 1493.8
Min nTPM: 790.9
RHH5234_R3606
1111.3
RHH5206_R3577
1493.8
RHH5263_R3635
790.9
RHH5298_R3664
1044.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.