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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.4
nTPM
Monaco:
122.9
nTPM
Schmiedel:
280.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.4
HPA sample
nTPM
gdT-cell nTPM: 15.0
Samples: 6
Max nTPM: 28.7
Min nTPM: 3.3
P10809_1007
28.7
P10809_1022
9.0
P10809_1041
3.3
P10809_1060
11.4
P10809_1077
9.6
P10809_1098
27.8
MAIT T-cell nTPM: 23.2
Samples: 6
Max nTPM: 37.0
Min nTPM: 9.8
P10809_1006
37.0
P10809_1024
9.8
P10809_1043
13.3
P10809_1062
25.2
P10809_1083
20.7
P10809_1097
32.9
Memory CD4 T-cell nTPM: 30.4
Samples: 6
Max nTPM: 62.7
Min nTPM: 12.4
P10809_1014
62.7
P10809_1026
34.3
P10809_1045
27.8
P10809_1064
17.3
P10809_1086
12.4
P10809_1113
27.6
Memory CD8 T-cell nTPM: 20.4
Samples: 5
Max nTPM: 50.4
Min nTPM: 8.1
P10809_1012
50.4
P10809_1027
8.1
P10809_1046
14.4
P10809_1065
9.7
P10809_1111
19.5
Naive CD4 T-cell nTPM: 28.1
Samples: 6
Max nTPM: 45.4
Min nTPM: 13.1
P10809_1015
45.4
P10809_1030
28.7
P10809_1049
13.1
P10809_1068
32.8
P10809_1085
16.2
P10809_1112
32.5
Naive CD8 T-cell nTPM: 20.2
Samples: 6
Max nTPM: 44.6
Min nTPM: 6.2
P10809_1016
44.6
P10809_1031
11.9
P10809_1050
13.9
P10809_1069
16.1
P10809_1087
6.2
P10809_1110
28.4
T-reg nTPM: 49.4
Samples: 6
Max nTPM: 93.5
Min nTPM: 32.6
P10809_1018
93.5
P10809_1037
44.1
P10809_1056
32.6
P10809_1075
44.4
P10809_1094
36.9
P10809_1106
45.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.1
Samples: 4
Max nTPM: 99.0
Min nTPM: 52.1
RHH5202_R3573
52.1
RHH5230_R3602
99.0
RHH5259_R3631
86.7
RHH5288_R3660
74.7
Effector memory CD8 T-cell nTPM: 54.0
Samples: 4
Max nTPM: 87.6
Min nTPM: 28.3
RHH5203_R3574
41.2
RHH5231_R3603
58.9
RHH5260_R3632
87.6
RHH5289_R3661
28.3
MAIT T-cell nTPM: 65.9
Samples: 4
Max nTPM: 100.0
Min nTPM: 44.0
RHH5233_R3605
44.0
RHH5205_R3576
54.8
RHH5262_R3634
100.0
RHH5297_R3663
64.7
Memory CD4 T-cell TFH nTPM: 95.2
Samples: 4
Max nTPM: 116.6
Min nTPM: 55.2
RHH5300_R3666
110.9
RHH5236_R3608
116.6
RHH5265_R3637
97.9
RHH5208_R3579
55.2
Memory CD4 T-cell Th1 nTPM: 89.2
Samples: 4
Max nTPM: 125.8
Min nTPM: 66.3
RHH5210_R3581
66.3
RHH5302_R3668
81.7
RHH5238_R3610
83.0
RHH5267_R3639
125.8
Memory CD4 T-cell Th1/Th17 nTPM: 87.5
Samples: 4
Max nTPM: 134.4
Min nTPM: 62.9
RHH5303_R3669
62.9
RHH5211_R3582
83.5
RHH5239_R3611
69.3
RHH5268_R3640
134.4
Memory CD4 T-cell Th17 nTPM: 119.3
Samples: 4
Max nTPM: 140.4
Min nTPM: 83.3
RHH5304_R3670
83.3
RHH5212_R3583
140.4
RHH5240_R3612
116.7
RHH5269_R3641
136.7
Memory CD4 T-cell Th2 nTPM: 111.0
Samples: 4
Max nTPM: 144.1
Min nTPM: 70.2
RHH5305_R3671
106.1
RHH5213_R3584
123.6
RHH5241_R3613
70.2
RHH5270_R3642
144.1
Naive CD4 T-cell nTPM: 92.8
Samples: 4
Max nTPM: 100.6
Min nTPM: 85.3
RHH5306_R3672
94.9
RHH5214_R3585
90.2
RHH5242_R3614
85.3
RHH5271_R3643
100.6
Naive CD8 T-cell nTPM: 70.8
Samples: 4
Max nTPM: 86.4
Min nTPM: 43.2
RHH5201_R3572
43.2
RHH5229_R3601
86.4
RHH5258_R3630
78.6
RHH5287_R3659
75.1
Non-Vd2 gdTCR nTPM: 40.8
Samples: 4
Max nTPM: 66.2
Min nTPM: 21.4
RHH5235_R3607
66.2
RHH5264_R3636
35.6
RHH5207_R3578
21.4
RHH5299_R3665
40.0
T-reg nTPM: 122.9
Samples: 4
Max nTPM: 148.7
Min nTPM: 104.5
RHH5301_R3667
119.1
RHH5237_R3609
119.3
RHH5266_R3638
148.7
RHH5209_R3580
104.5
Terminal effector memory CD4 T-cell nTPM: 42.1
Samples: 2
Max nTPM: 42.2
Min nTPM: 42.0
RHH5243_R3615
42.2
RHH5272_R3644
42.0
Terminal effector memory CD8 T-cell nTPM: 40.0
Samples: 4
Max nTPM: 71.5
Min nTPM: 23.4
RHH5232_R3604
40.0
RHH5204_R3575
23.4
RHH5261_R3633
71.5
RHH5296_R3662
25.0
Vd2 gdTCR nTPM: 64.4
Samples: 4
Max nTPM: 85.6
Min nTPM: 41.6
RHH5234_R3606
66.5
RHH5206_R3577
41.6
RHH5263_R3635
85.6
RHH5298_R3664
63.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
