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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.9
nTPM
Monaco:
23.8
nTPM
Schmiedel:
25.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.9
HPA sample
nTPM
gdT-cell nTPM: 10.2
Samples: 6
Max nTPM: 11.7
Min nTPM: 7.4
P10809_1007
10.5
P10809_1022
11.1
P10809_1041
11.7
P10809_1060
7.4
P10809_1077
11.1
P10809_1098
9.5
MAIT T-cell nTPM: 12.9
Samples: 6
Max nTPM: 17.6
Min nTPM: 10.7
P10809_1006
11.9
P10809_1024
17.6
P10809_1043
13.1
P10809_1062
10.7
P10809_1083
11.6
P10809_1097
12.3
Memory CD4 T-cell nTPM: 3.3
Samples: 6
Max nTPM: 4.4
Min nTPM: 1.5
P10809_1014
3.0
P10809_1026
1.5
P10809_1045
3.9
P10809_1064
3.7
P10809_1086
4.4
P10809_1113
3.1
Memory CD8 T-cell nTPM: 9.7
Samples: 5
Max nTPM: 13.8
Min nTPM: 3.2
P10809_1012
3.2
P10809_1027
13.8
P10809_1046
9.2
P10809_1065
13.7
P10809_1111
8.6
Naive CD4 T-cell nTPM: 0.7
Samples: 6
Max nTPM: 2.7
Min nTPM: 0.1
P10809_1015
0.3
P10809_1030
0.1
P10809_1049
0.5
P10809_1068
0.2
P10809_1085
2.7
P10809_1112
0.5
Naive CD8 T-cell nTPM: 4.1
Samples: 6
Max nTPM: 6.9
Min nTPM: 0.8
P10809_1016
0.8
P10809_1031
4.8
P10809_1050
3.4
P10809_1069
6.8
P10809_1087
6.9
P10809_1110
1.9
T-reg nTPM: 6.4
Samples: 6
Max nTPM: 11.5
Min nTPM: 3.6
P10809_1018
4.1
P10809_1037
7.0
P10809_1056
11.5
P10809_1075
7.5
P10809_1094
4.4
P10809_1106
3.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 15.3
Min nTPM: 8.9
RHH5202_R3573
8.9
RHH5230_R3602
11.1
RHH5259_R3631
14.3
RHH5288_R3660
15.3
Effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 26.6
Min nTPM: 16.2
RHH5203_R3574
20.5
RHH5231_R3603
16.2
RHH5260_R3632
17.3
RHH5289_R3661
26.6
MAIT T-cell nTPM: 17.2
Samples: 4
Max nTPM: 20.5
Min nTPM: 11.2
RHH5233_R3605
20.0
RHH5205_R3576
11.2
RHH5262_R3634
17.0
RHH5297_R3663
20.5
Memory CD4 T-cell TFH nTPM: 2.8
Samples: 4
Max nTPM: 6.8
Min nTPM: 0.5
RHH5300_R3666
6.8
RHH5236_R3608
1.2
RHH5265_R3637
2.8
RHH5208_R3579
0.5
Memory CD4 T-cell Th1 nTPM: 9.1
Samples: 4
Max nTPM: 16.5
Min nTPM: 6.2
RHH5210_R3581
6.2
RHH5302_R3668
7.3
RHH5238_R3610
6.3
RHH5267_R3639
16.5
Memory CD4 T-cell Th1/Th17 nTPM: 10.8
Samples: 4
Max nTPM: 12.7
Min nTPM: 8.1
RHH5303_R3669
12.3
RHH5211_R3582
12.7
RHH5239_R3611
8.1
RHH5268_R3640
10.1
Memory CD4 T-cell Th17 nTPM: 14.4
Samples: 4
Max nTPM: 17.3
Min nTPM: 10.4
RHH5304_R3670
14.8
RHH5212_R3583
17.3
RHH5240_R3612
10.4
RHH5269_R3641
14.9
Memory CD4 T-cell Th2 nTPM: 15.3
Samples: 4
Max nTPM: 19.4
Min nTPM: 12.1
RHH5305_R3671
12.1
RHH5213_R3584
19.4
RHH5241_R3613
16.7
RHH5270_R3642
13.1
Naive CD4 T-cell nTPM: 2.4
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.5
RHH5306_R3672
1.4
RHH5214_R3585
0.5
RHH5242_R3614
4.7
RHH5271_R3643
3.1
Naive CD8 T-cell nTPM: 1.5
Samples: 4
Max nTPM: 2.4
Min nTPM: 0.5
RHH5201_R3572
0.7
RHH5229_R3601
0.5
RHH5258_R3630
2.4
RHH5287_R3659
2.4
Non-Vd2 gdTCR nTPM: 23.8
Samples: 4
Max nTPM: 31.5
Min nTPM: 13.5
RHH5235_R3607
28.8
RHH5264_R3636
13.5
RHH5207_R3578
31.5
RHH5299_R3665
21.5
T-reg nTPM: 10.5
Samples: 4
Max nTPM: 16.6
Min nTPM: 7.2
RHH5301_R3667
9.8
RHH5237_R3609
16.6
RHH5266_R3638
8.3
RHH5209_R3580
7.2
Terminal effector memory CD4 T-cell nTPM: 23.1
Samples: 2
Max nTPM: 34.7
Min nTPM: 11.5
RHH5243_R3615
34.7
RHH5272_R3644
11.5
Terminal effector memory CD8 T-cell nTPM: 21.1
Samples: 4
Max nTPM: 25.2
Min nTPM: 17.9
RHH5232_R3604
17.9
RHH5204_R3575
18.5
RHH5261_R3633
22.9
RHH5296_R3662
25.2
Vd2 gdTCR nTPM: 17.6
Samples: 4
Max nTPM: 26.5
Min nTPM: 13.7
RHH5234_R3606
13.7
RHH5206_R3577
16.2
RHH5263_R3635
26.5
RHH5298_R3664
14.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
