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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3104.6
nTPM
Monaco:
10601.5
nTPM
Schmiedel:
31700.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3104.6
HPA sample
nTPM
gdT-cell nTPM: 1905.4
Samples: 6
Max nTPM: 4163.4
Min nTPM: 1046.8
P10809_1007
4163.4
P10809_1022
1439.5
P10809_1041
1755.1
P10809_1060
1046.8
P10809_1077
1396.6
P10809_1098
1630.7
MAIT T-cell nTPM: 2618.8
Samples: 6
Max nTPM: 4462.5
Min nTPM: 1810.2
P10809_1006
4462.5
P10809_1024
2421.1
P10809_1043
1810.2
P10809_1062
2253.2
P10809_1083
2475.6
P10809_1097
2289.9
Memory CD4 T-cell nTPM: 2136.2
Samples: 6
Max nTPM: 4312.1
Min nTPM: 1463.5
P10809_1014
4312.1
P10809_1026
2367.7
P10809_1045
1561.1
P10809_1064
1638.1
P10809_1086
1463.5
P10809_1113
1474.4
Memory CD8 T-cell nTPM: 2285.0
Samples: 5
Max nTPM: 4357.6
Min nTPM: 1359.9
P10809_1012
4357.6
P10809_1027
2341.8
P10809_1046
1531.3
P10809_1065
1834.2
P10809_1111
1359.9
Naive CD4 T-cell nTPM: 2460.2
Samples: 6
Max nTPM: 5509.2
Min nTPM: 1348.2
P10809_1015
5509.2
P10809_1030
2837.0
P10809_1049
1437.7
P10809_1068
1793.1
P10809_1085
1835.7
P10809_1112
1348.2
Naive CD8 T-cell nTPM: 3104.6
Samples: 6
Max nTPM: 7266.9
Min nTPM: 1419.2
P10809_1016
7266.9
P10809_1031
3350.1
P10809_1050
2384.6
P10809_1069
2118.3
P10809_1087
1419.2
P10809_1110
2088.7
T-reg nTPM: 1672.2
Samples: 6
Max nTPM: 3348.4
Min nTPM: 1070.3
P10809_1018
3348.4
P10809_1037
1363.3
P10809_1056
1759.1
P10809_1075
1261.4
P10809_1094
1070.3
P10809_1106
1230.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10601.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6379.4
Samples: 4
Max nTPM: 7614.2
Min nTPM: 3633.6
RHH5202_R3573
7392.7
RHH5230_R3602
6877.2
RHH5259_R3631
3633.6
RHH5288_R3660
7614.2
Effector memory CD8 T-cell nTPM: 8038.8
Samples: 4
Max nTPM: 11991.0
Min nTPM: 5852.7
RHH5203_R3574
5852.7
RHH5231_R3603
11991.0
RHH5260_R3632
7674.6
RHH5289_R3661
6636.9
MAIT T-cell nTPM: 10072.6
Samples: 4
Max nTPM: 12227.4
Min nTPM: 6569.0
RHH5233_R3605
10250.9
RHH5205_R3576
6569.0
RHH5262_R3634
12227.4
RHH5297_R3663
11243.1
Memory CD4 T-cell TFH nTPM: 7226.0
Samples: 4
Max nTPM: 10075.3
Min nTPM: 4650.3
RHH5300_R3666
6441.1
RHH5236_R3608
10075.3
RHH5265_R3637
4650.3
RHH5208_R3579
7737.2
Memory CD4 T-cell Th1 nTPM: 5965.3
Samples: 4
Max nTPM: 7870.1
Min nTPM: 3929.3
RHH5210_R3581
7205.7
RHH5302_R3668
7870.1
RHH5238_R3610
3929.3
RHH5267_R3639
4856.2
Memory CD4 T-cell Th1/Th17 nTPM: 7122.7
Samples: 4
Max nTPM: 9546.2
Min nTPM: 4168.6
RHH5303_R3669
9239.5
RHH5211_R3582
9546.2
RHH5239_R3611
4168.6
RHH5268_R3640
5536.5
Memory CD4 T-cell Th17 nTPM: 7850.9
Samples: 4
Max nTPM: 9218.8
Min nTPM: 4766.0
RHH5304_R3670
8311.0
RHH5212_R3583
9107.6
RHH5240_R3612
9218.8
RHH5269_R3641
4766.0
Memory CD4 T-cell Th2 nTPM: 8487.3
Samples: 4
Max nTPM: 10652.2
Min nTPM: 6454.4
RHH5305_R3671
9180.4
RHH5213_R3584
10652.2
RHH5241_R3613
7662.0
RHH5270_R3642
6454.4
Naive CD4 T-cell nTPM: 8138.9
Samples: 4
Max nTPM: 10498.8
Min nTPM: 6299.7
RHH5306_R3672
8441.8
RHH5214_R3585
10498.8
RHH5242_R3614
7315.4
RHH5271_R3643
6299.7
Naive CD8 T-cell nTPM: 10601.5
Samples: 4
Max nTPM: 13113.1
Min nTPM: 8739.0
RHH5201_R3572
11009.1
RHH5229_R3601
9544.6
RHH5258_R3630
8739.0
RHH5287_R3659
13113.1
Non-Vd2 gdTCR nTPM: 7885.1
Samples: 4
Max nTPM: 11828.8
Min nTPM: 5699.8
RHH5235_R3607
5699.8
RHH5264_R3636
11828.8
RHH5207_R3578
6191.8
RHH5299_R3665
7819.9
T-reg nTPM: 7297.5
Samples: 4
Max nTPM: 10680.3
Min nTPM: 4897.0
RHH5301_R3667
6913.0
RHH5237_R3609
10680.3
RHH5266_R3638
4897.0
RHH5209_R3580
6699.8
Terminal effector memory CD4 T-cell nTPM: 6995.4
Samples: 2
Max nTPM: 8069.3
Min nTPM: 5921.5
RHH5243_R3615
5921.5
RHH5272_R3644
8069.3
Terminal effector memory CD8 T-cell nTPM: 8099.1
Samples: 4
Max nTPM: 9539.5
Min nTPM: 6150.4
RHH5232_R3604
9539.5
RHH5204_R3575
6150.4
RHH5261_R3633
8839.1
RHH5296_R3662
7867.2
Vd2 gdTCR nTPM: 10387.2
Samples: 4
Max nTPM: 11763.9
Min nTPM: 8612.0
RHH5234_R3606
8612.0
RHH5206_R3577
10613.2
RHH5263_R3635
11763.9
RHH5298_R3664
10559.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.