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CIPC
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PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CIPC
Synonyms KIAA1737
Gene descriptioni

Full gene name according to HGNC.

CLOCK interacting pacemaker
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q24.3
Chromosome location (bp) 77098126 - 77117287
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000198894 (version 109)
Entrez gene 85457
HGNC HGNC:20365
UniProt Q9C0C6 (UniProt - Evidence at protein level)
neXtProt NX_Q9C0C6
GeneCards CIPC
Antibodypedia CIPC antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transcriptional repressor which may act as a negative-feedback regulator of CLOCK-BMAL1 transcriptional activity in the circadian-clock mechanism. May stimulate BMAL1-dependent phosphorylation of CLOCK. However, the physiogical relevance of these observations is unsure, since experiments in an animal model showed that CIPC is not critially required for basic circadian clock.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Repressor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Biological rhythms, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to be involved in negative regulation of circadian rhythm and negative regulation of transcription, DNA-templated. Located in cytosol; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CIPC-201
ENSP00000355319
ENST00000361786
Q9C0C6
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0048511 [rhythmic process]
Show all
399 aa
42.7 kDa
No 0
CIPC-202
ENSP00000452380
ENST00000554447
G3V5J4
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
151 aa
16.5 kDa
No 0
CIPC-203
ENSP00000451522
ENST00000554658
G3V405
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
134 aa
14.7 kDa
No 0
CIPC-204
ENSP00000451493
ENST00000555200
G3V3Y7
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
141 aa
15.4 kDa
No 0
CIPC-205
ENSP00000451997
ENST00000555437
G3V4V0
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
61 aa
6.5 kDa
No 0
CIPC-206
ENSP00000450972
ENST00000555611
G3V310
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
103 aa
11.3 kDa
No 0
CIPC-208
ENSP00000452589
ENST00000557115
G3V5Y7
[Direct mapping] CLOCK-interacting pacemaker
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0042754 [negative regulation of circadian rhythm]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
156 aa
17.1 kDa
No 0

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