HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:33.4 nTPM
HPA Brain:77.6 nTPM
GTEx:33.4 nTPM
FANTOM5:115.1 Scaled Tags Per Million
Pig:25.8 nTPM
Mouse:20.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067151
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.6
Sample id Sample description nTPM
Hippocampus
nTPM: 66.3
2529 Female, age 94, left hemisphere 95.5
1911 Female, age 85, right hemisphere 76.7
2621 Female, age 67, right hemisphere 69.5
2148 Female, age 91, left hemisphere 58.8
1898 Male, age 80, left hemisphere 52.2
1855 Male, age 76, left hemisphere 45.3
Dentate gyrus
nTPM: 54.8
2530 Female, age 94, left hemisphere 71.6
2531 Female, age 67, both hemispheres 56.3
2528 Male, age 74, both hemispheres 54.6
2246 Female, age 85, both hemispheres 49.8
1927 Female, age 91, both hemispheres 49.0
2010 Male, age 76, both hemispheres 47.1
Entorhinal gyrus
nTPM: 59.8
2117 Female, age 91, right hemisphere 79.7
2686 Male, age 75, right hemisphere 67.0
2764 Male, age 80, right hemisphere 61.1
1787 Male, age 76, left hemisphere 54.1
1938 Female, age 85, left hemisphere 50.1
2613 Female, age 94, left hemisphere 47.0
Hippocampus, CA1
nTPM: 48.0
2527 Male, age 74, both hemispheres 62.2
1873 Female, age 85, both hemispheres 49.3
2749 Male, age 80, left hemisphere 49.0
2082 Female, age 91, right hemisphere 47.1
2045 Male, age 76, both hemispheres 32.6
Hippocampus, CA2
nTPM: 60.5
2437 Female, age 94, left hemisphere 77.8
2249 Male, age 74, both hemispheres 63.7
1963 Male, age 80, left hemisphere 62.7
2113 Female, age 91, right hemisphere 60.2
1940 Female, age 85, left hemisphere 51.9
1892 Male, age 76, both hemispheres 47.0
Hippocampus, CA3
nTPM: 57.6
1891 Female, age 85, both hemispheres 69.7
2861 Female, age 67, both hemispheres 59.3
2137 Male, age 80, left hemisphere 58.6
1867 Male, age 76, both hemispheres 57.7
2620 Female, age 94, left hemisphere 57.7
2436 Male, age 74, both hemispheres 42.7
Parahippocampal cortex
nTPM: 55.8
2245 Female, age 91, both hemispheres 65.8
2692 Male, age 74, both hemispheres 65.5
2622 Female, age 67, right hemisphere 62.4
1990 Female, age 91, right hemisphere 60.4
2250 Female, age 67, right hemisphere 57.1
2532 Female, age 72, left hemisphere 57.0
2018 Male, age 76, both hemispheres 55.5
1933 Female, age 85, both hemispheres 47.1
2693 Female, age 94, both hemispheres 46.9
1850 Male, age 80, both hemispheres 40.7
Perirhinal gyrus
nTPM: 43.7
2521 Female, age 94, right hemisphere 49.9
2848 Male, age 76, right hemisphere 47.9
1794 Male, age 80, right hemisphere 43.1
1841 Female, age 85, right hemisphere 41.7
1847 Female, age 91, left hemisphere 35.9
Subiculum
nTPM: 77.6
2438 Female, age 94, left hemisphere 109.9
2042 Male, age 76, both hemispheres 85.2
1901 Male, age 80, both hemispheres 74.6
2619 Male, age 74, both hemispheres 72.2
1977 Female, age 85, both hemispheres 64.6
2729 Female, age 91, right hemisphere 58.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 78.5
Min nTPM: 12.0
Std nTPM: 10.0
Median nTPM: 32.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 66.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 59.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 59.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 54.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 52.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 50.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 50.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 49.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 48.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.1
FF:10153-102I9 76 years, female 130.5
FF:10169-103B7 60 years, female 99.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.8
Pig sample Sample description nTPM
Subiculum
nTPM: 20.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 16.8
Sample A Female 25.8
Sample B Female 20.0
Sample C Male 17.2
Sample D Male 16.8
Dorsal hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.2
Sample A Female 30.9
Sample B Female 25.1
Sample C Male 27.0
Sample D Male 20.2
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 20.3
Sample C Male 25.5
Sample D Male 15.2
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.4
Sample A Female 20.2
Sample B Female 19.4
Sample C Male 24.4
Sample D Male 22.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.9
Sample A Male 23.4
Sample B Male 22.2
Sample C Female 18.3
Sample D Female 14.9
Hippocampal formation
nTPM: 20.1
Samples: 4

Max nTPM: 22.3
Min nTPM: 18.8
Sample A Male 19.3
Sample B Male 22.3
Sample C Female 20.0
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71212199 Antisense, RP_050816_03_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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