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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4618.2
nTPM
Monaco:
765.4
nTPM
Schmiedel:
2287.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4618.2
HPA sample
nTPM
gdT-cell nTPM: 1834.3
Samples: 6
Max nTPM: 2511.1
Min nTPM: 1466.6
P10809_1007
2511.1
P10809_1022
1466.6
P10809_1041
1706.1
P10809_1060
1487.7
P10809_1077
2067.7
P10809_1098
1766.5
MAIT T-cell nTPM: 2939.0
Samples: 6
Max nTPM: 3232.5
Min nTPM: 2604.5
P10809_1006
2958.2
P10809_1024
3028.4
P10809_1043
2714.7
P10809_1062
3232.5
P10809_1083
2604.5
P10809_1097
3095.5
Memory CD4 T-cell nTPM: 4034.9
Samples: 6
Max nTPM: 5328.9
Min nTPM: 3198.6
P10809_1014
5328.9
P10809_1026
4357.3
P10809_1045
3880.1
P10809_1064
3198.6
P10809_1086
3379.5
P10809_1113
4065.0
Memory CD8 T-cell nTPM: 2793.2
Samples: 5
Max nTPM: 3093.9
Min nTPM: 2492.3
P10809_1012
2999.2
P10809_1027
3093.9
P10809_1046
2699.5
P10809_1065
2492.3
P10809_1111
2680.9
Naive CD4 T-cell nTPM: 4618.2
Samples: 6
Max nTPM: 6606.0
Min nTPM: 3317.8
P10809_1015
6606.0
P10809_1030
5539.6
P10809_1049
3598.4
P10809_1068
4459.2
P10809_1085
3317.8
P10809_1112
4188.4
Naive CD8 T-cell nTPM: 3738.8
Samples: 6
Max nTPM: 7098.0
Min nTPM: 2374.9
P10809_1016
7098.0
P10809_1031
3513.3
P10809_1050
3219.8
P10809_1069
2936.7
P10809_1087
2374.9
P10809_1110
3289.8
T-reg nTPM: 2832.5
Samples: 6
Max nTPM: 3501.6
Min nTPM: 2018.8
P10809_1018
2685.0
P10809_1037
3501.6
P10809_1056
2018.8
P10809_1075
3114.3
P10809_1094
3218.0
P10809_1106
2457.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
765.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 640.4
Samples: 4
Max nTPM: 1157.0
Min nTPM: 212.0
RHH5202_R3573
212.0
RHH5230_R3602
842.1
RHH5259_R3631
1157.0
RHH5288_R3660
350.5
Effector memory CD8 T-cell nTPM: 258.6
Samples: 4
Max nTPM: 464.0
Min nTPM: 181.1
RHH5203_R3574
181.1
RHH5231_R3603
184.4
RHH5260_R3632
464.0
RHH5289_R3661
204.9
MAIT T-cell nTPM: 423.5
Samples: 4
Max nTPM: 605.8
Min nTPM: 241.4
RHH5233_R3605
241.4
RHH5205_R3576
605.8
RHH5262_R3634
517.2
RHH5297_R3663
329.4
Memory CD4 T-cell TFH nTPM: 282.8
Samples: 4
Max nTPM: 329.6
Min nTPM: 181.6
RHH5300_R3666
297.4
RHH5236_R3608
322.7
RHH5265_R3637
329.6
RHH5208_R3579
181.6
Memory CD4 T-cell Th1 nTPM: 765.2
Samples: 4
Max nTPM: 1514.7
Min nTPM: 225.2
RHH5210_R3581
225.2
RHH5302_R3668
432.5
RHH5238_R3610
1514.7
RHH5267_R3639
888.3
Memory CD4 T-cell Th1/Th17 nTPM: 620.6
Samples: 4
Max nTPM: 969.3
Min nTPM: 228.1
RHH5303_R3669
349.2
RHH5211_R3582
228.1
RHH5239_R3611
969.3
RHH5268_R3640
935.6
Memory CD4 T-cell Th17 nTPM: 600.6
Samples: 4
Max nTPM: 887.5
Min nTPM: 245.8
RHH5304_R3670
887.5
RHH5212_R3583
245.8
RHH5240_R3612
701.0
RHH5269_R3641
568.0
Memory CD4 T-cell Th2 nTPM: 613.1
Samples: 4
Max nTPM: 1128.1
Min nTPM: 384.0
RHH5305_R3671
1128.1
RHH5213_R3584
429.6
RHH5241_R3613
384.0
RHH5270_R3642
510.8
Naive CD4 T-cell nTPM: 765.4
Samples: 4
Max nTPM: 1086.1
Min nTPM: 449.6
RHH5306_R3672
1086.1
RHH5214_R3585
697.7
RHH5242_R3614
449.6
RHH5271_R3643
828.0
Naive CD8 T-cell nTPM: 762.3
Samples: 4
Max nTPM: 1361.9
Min nTPM: 336.9
RHH5201_R3572
351.6
RHH5229_R3601
1361.9
RHH5258_R3630
336.9
RHH5287_R3659
998.7
Non-Vd2 gdTCR nTPM: 264.7
Samples: 4
Max nTPM: 486.7
Min nTPM: 164.1
RHH5235_R3607
486.7
RHH5264_R3636
176.0
RHH5207_R3578
231.8
RHH5299_R3665
164.1
T-reg nTPM: 475.6
Samples: 4
Max nTPM: 692.8
Min nTPM: 238.5
RHH5301_R3667
424.2
RHH5237_R3609
238.5
RHH5266_R3638
692.8
RHH5209_R3580
547.0
Terminal effector memory CD4 T-cell nTPM: 346.2
Samples: 2
Max nTPM: 470.1
Min nTPM: 222.2
RHH5243_R3615
470.1
RHH5272_R3644
222.2
Terminal effector memory CD8 T-cell nTPM: 304.0
Samples: 4
Max nTPM: 510.7
Min nTPM: 114.8
RHH5232_R3604
114.8
RHH5204_R3575
404.0
RHH5261_R3633
510.7
RHH5296_R3662
186.3
Vd2 gdTCR nTPM: 557.4
Samples: 4
Max nTPM: 775.6
Min nTPM: 373.4
RHH5234_R3606
405.5
RHH5206_R3577
775.6
RHH5263_R3635
675.1
RHH5298_R3664
373.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.