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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
424.9
nTPM
Monaco:
37.9
nTPM
Schmiedel:
180.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
424.9
HPA sample
nTPM
gdT-cell nTPM: 140.4
Samples: 6
Max nTPM: 215.6
Min nTPM: 59.3
P10809_1007
59.3
P10809_1022
141.2
P10809_1041
215.6
P10809_1060
133.5
P10809_1077
135.1
P10809_1098
157.6
MAIT T-cell nTPM: 169.6
Samples: 6
Max nTPM: 222.9
Min nTPM: 48.6
P10809_1006
48.6
P10809_1024
222.9
P10809_1043
221.7
P10809_1062
160.5
P10809_1083
151.0
P10809_1097
212.6
Memory CD4 T-cell nTPM: 230.7
Samples: 6
Max nTPM: 333.5
Min nTPM: 60.3
P10809_1014
60.3
P10809_1026
288.9
P10809_1045
333.5
P10809_1064
269.4
P10809_1086
245.7
P10809_1113
186.3
Memory CD8 T-cell nTPM: 178.0
Samples: 5
Max nTPM: 254.7
Min nTPM: 59.5
P10809_1012
59.5
P10809_1027
212.9
P10809_1046
254.7
P10809_1065
179.6
P10809_1111
183.3
Naive CD4 T-cell nTPM: 105.9
Samples: 6
Max nTPM: 194.1
Min nTPM: 31.2
P10809_1015
31.2
P10809_1030
112.5
P10809_1049
194.1
P10809_1068
98.1
P10809_1085
108.2
P10809_1112
91.4
Naive CD8 T-cell nTPM: 100.1
Samples: 6
Max nTPM: 127.3
Min nTPM: 29.0
P10809_1016
29.0
P10809_1031
122.4
P10809_1050
121.1
P10809_1069
123.7
P10809_1087
127.3
P10809_1110
77.0
T-reg nTPM: 424.9
Samples: 6
Max nTPM: 707.2
Min nTPM: 105.4
P10809_1018
105.4
P10809_1037
446.2
P10809_1056
707.2
P10809_1075
518.5
P10809_1094
406.6
P10809_1106
365.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.6
Samples: 4
Max nTPM: 42.5
Min nTPM: 5.8
RHH5202_R3573
5.8
RHH5230_R3602
20.0
RHH5259_R3631
42.5
RHH5288_R3660
18.1
Effector memory CD8 T-cell nTPM: 22.7
Samples: 4
Max nTPM: 39.0
Min nTPM: 12.6
RHH5203_R3574
26.4
RHH5231_R3603
12.6
RHH5260_R3632
39.0
RHH5289_R3661
12.9
MAIT T-cell nTPM: 22.9
Samples: 4
Max nTPM: 42.6
Min nTPM: 12.7
RHH5233_R3605
12.7
RHH5205_R3576
18.6
RHH5262_R3634
42.6
RHH5297_R3663
17.8
Memory CD4 T-cell TFH nTPM: 22.4
Samples: 4
Max nTPM: 31.9
Min nTPM: 12.0
RHH5300_R3666
31.9
RHH5236_R3608
26.3
RHH5265_R3637
19.4
RHH5208_R3579
12.0
Memory CD4 T-cell Th1 nTPM: 35.7
Samples: 4
Max nTPM: 58.7
Min nTPM: 10.8
RHH5210_R3581
10.8
RHH5302_R3668
43.1
RHH5238_R3610
30.1
RHH5267_R3639
58.7
Memory CD4 T-cell Th1/Th17 nTPM: 28.4
Samples: 4
Max nTPM: 41.5
Min nTPM: 19.1
RHH5303_R3669
25.6
RHH5211_R3582
27.5
RHH5239_R3611
19.1
RHH5268_R3640
41.5
Memory CD4 T-cell Th17 nTPM: 28.2
Samples: 4
Max nTPM: 38.1
Min nTPM: 13.8
RHH5304_R3670
38.1
RHH5212_R3583
13.8
RHH5240_R3612
27.5
RHH5269_R3641
33.5
Memory CD4 T-cell Th2 nTPM: 33.0
Samples: 4
Max nTPM: 52.0
Min nTPM: 22.8
RHH5305_R3671
33.6
RHH5213_R3584
23.4
RHH5241_R3613
22.8
RHH5270_R3642
52.0
Naive CD4 T-cell nTPM: 15.3
Samples: 4
Max nTPM: 20.9
Min nTPM: 4.2
RHH5306_R3672
18.2
RHH5214_R3585
20.9
RHH5242_R3614
4.2
RHH5271_R3643
17.8
Naive CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 16.4
Min nTPM: 4.8
RHH5201_R3572
4.8
RHH5229_R3601
5.4
RHH5258_R3630
16.4
RHH5287_R3659
10.3
Non-Vd2 gdTCR nTPM: 17.0
Samples: 4
Max nTPM: 26.1
Min nTPM: 10.7
RHH5235_R3607
26.1
RHH5264_R3636
18.3
RHH5207_R3578
10.7
RHH5299_R3665
12.7
T-reg nTPM: 26.9
Samples: 4
Max nTPM: 37.3
Min nTPM: 19.0
RHH5301_R3667
25.1
RHH5237_R3609
19.0
RHH5266_R3638
37.3
RHH5209_R3580
26.2
Terminal effector memory CD4 T-cell nTPM: 22.1
Samples: 2
Max nTPM: 22.6
Min nTPM: 21.5
RHH5243_R3615
22.6
RHH5272_R3644
21.5
Terminal effector memory CD8 T-cell nTPM: 23.1
Samples: 4
Max nTPM: 43.5
Min nTPM: 5.8
RHH5232_R3604
5.8
RHH5204_R3575
43.5
RHH5261_R3633
32.5
RHH5296_R3662
10.7
Vd2 gdTCR nTPM: 37.9
Samples: 4
Max nTPM: 53.5
Min nTPM: 20.1
RHH5234_R3606
20.1
RHH5206_R3577
53.5
RHH5263_R3635
44.9
RHH5298_R3664
33.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
