HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:71.0 nTPM
HPA Brain:96.6 nTPM
GTEx:71.0 nTPM
FANTOM5:60.1 Scaled Tags Per Million
Pig:35.0 nTPM
Mouse:60.4 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064621
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.6
Sample id Sample description nTPM
Hippocampus
nTPM: 88.7
2621 Female, age 67, right hemisphere 118.7
2529 Female, age 94, left hemisphere 107.6
1911 Female, age 85, right hemisphere 100.5
1855 Male, age 76, left hemisphere 76.4
1898 Male, age 80, left hemisphere 69.1
2148 Female, age 91, left hemisphere 59.9
Dentate gyrus
nTPM: 88.1
2531 Female, age 67, both hemispheres 177.6
2010 Male, age 76, both hemispheres 84.0
2246 Female, age 85, both hemispheres 77.0
2528 Male, age 74, both hemispheres 72.4
1927 Female, age 91, both hemispheres 65.4
2530 Female, age 94, left hemisphere 52.4
Entorhinal gyrus
nTPM: 75.8
1787 Male, age 76, left hemisphere 126.3
2613 Female, age 94, left hemisphere 77.5
1938 Female, age 85, left hemisphere 75.0
2117 Female, age 91, right hemisphere 64.1
2764 Male, age 80, right hemisphere 60.0
2686 Male, age 75, right hemisphere 52.1
Hippocampus, CA1
nTPM: 89.0
2749 Male, age 80, left hemisphere 106.1
2527 Male, age 74, both hemispheres 105.6
2045 Male, age 76, both hemispheres 87.5
2082 Female, age 91, right hemisphere 79.9
1873 Female, age 85, both hemispheres 65.9
Hippocampus, CA2
nTPM: 69.8
2113 Female, age 91, right hemisphere 83.3
1963 Male, age 80, left hemisphere 78.4
2249 Male, age 74, both hemispheres 75.3
1892 Male, age 76, both hemispheres 68.4
1940 Female, age 85, left hemisphere 64.4
2437 Female, age 94, left hemisphere 48.9
Hippocampus, CA3
nTPM: 96.6
2861 Female, age 67, both hemispheres 140.4
2137 Male, age 80, left hemisphere 116.3
2620 Female, age 94, left hemisphere 115.6
1867 Male, age 76, both hemispheres 86.2
1891 Female, age 85, both hemispheres 64.0
2436 Male, age 74, both hemispheres 57.4
Parahippocampal cortex
nTPM: 73.3
2250 Female, age 67, right hemisphere 116.7
2018 Male, age 76, both hemispheres 115.3
2245 Female, age 91, both hemispheres 100.5
1933 Female, age 85, both hemispheres 86.1
2693 Female, age 94, both hemispheres 73.0
2622 Female, age 67, right hemisphere 59.7
2532 Female, age 72, left hemisphere 49.3
1990 Female, age 91, right hemisphere 49.1
1850 Male, age 80, both hemispheres 44.6
2692 Male, age 74, both hemispheres 39.0
Perirhinal gyrus
nTPM: 86.0
2521 Female, age 94, right hemisphere 115.3
2848 Male, age 76, right hemisphere 90.5
1847 Female, age 91, left hemisphere 80.9
1841 Female, age 85, right hemisphere 73.4
1794 Male, age 80, right hemisphere 69.8
Subiculum
nTPM: 61.2
1977 Female, age 85, both hemispheres 82.5
2042 Male, age 76, both hemispheres 78.8
2729 Female, age 91, right hemisphere 61.4
1901 Male, age 80, both hemispheres 58.1
2619 Male, age 74, both hemispheres 54.4
2438 Female, age 94, left hemisphere 32.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.0
Samples: 197

Max nTPM: 281.3
Min nTPM: 5.0
Std nTPM: 48.1
Median nTPM: 58.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 281.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 257.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 228.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 226.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 215.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 203.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 186.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 172.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 169.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 164.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 161.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.1
FF:10153-102I9 76 years, female 69.4
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.0
Pig sample Sample description nTPM
Subiculum
nTPM: 20.9
Samples: 4

Max nTPM: 26.4
Min nTPM: 15.8
Sample A Female 26.4
Sample B Female 21.0
Sample C Male 20.5
Sample D Male 15.8
Dorsal hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 44.9
Min nTPM: 21.0
Sample A Female 39.7
Sample B Female 44.9
Sample C Male 21.0
Sample D Male 34.4
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 22.2
Min nTPM: 11.6
Sample A Female 19.4
Sample B Female 15.1
Sample C Male 22.2
Sample D Male 11.6
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 48.0
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 31.5
Sample C Male 30.2
Sample D Male 48.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 35.0
Sample A Male 39.9
Sample B Male 35.0
Sample C Female 46.2
Sample D Female 44.5
Hippocampal formation
nTPM: 60.4
Samples: 4

Max nTPM: 67.9
Min nTPM: 52.0
Sample A Male 60.0
Sample B Male 67.9
Sample C Female 61.5
Sample D Female 52.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
69449020 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 7.8
71250306 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 5.3

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