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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.5
nTPM
Monaco:
48.5
nTPM
Schmiedel:
8.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.5
HPA sample
nTPM
gdT-cell nTPM: 27.2
Samples: 6
Max nTPM: 42.5
Min nTPM: 20.7
P10809_1007
20.7
P10809_1022
21.3
P10809_1041
25.6
P10809_1060
26.9
P10809_1077
42.5
P10809_1098
25.9
MAIT T-cell nTPM: 26.3
Samples: 6
Max nTPM: 29.9
Min nTPM: 20.7
P10809_1006
20.7
P10809_1024
24.1
P10809_1043
28.2
P10809_1062
29.9
P10809_1083
29.6
P10809_1097
25.4
Memory CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 44.6
Min nTPM: 21.2
P10809_1014
21.2
P10809_1026
26.1
P10809_1045
27.3
P10809_1064
44.6
P10809_1086
40.2
P10809_1113
29.1
Memory CD8 T-cell nTPM: 30.1
Samples: 5
Max nTPM: 45.1
Min nTPM: 23.2
P10809_1012
23.2
P10809_1027
30.5
P10809_1046
24.9
P10809_1065
45.1
P10809_1111
27.0
Naive CD4 T-cell nTPM: 21.2
Samples: 6
Max nTPM: 30.1
Min nTPM: 16.1
P10809_1015
16.1
P10809_1030
19.5
P10809_1049
19.9
P10809_1068
24.3
P10809_1085
30.1
P10809_1112
17.4
Naive CD8 T-cell nTPM: 28.7
Samples: 6
Max nTPM: 40.0
Min nTPM: 18.0
P10809_1016
19.6
P10809_1031
30.6
P10809_1050
27.7
P10809_1069
36.4
P10809_1087
40.0
P10809_1110
18.0
T-reg nTPM: 43.5
Samples: 6
Max nTPM: 65.9
Min nTPM: 25.2
P10809_1018
25.2
P10809_1037
29.6
P10809_1056
61.4
P10809_1075
65.9
P10809_1094
38.2
P10809_1106
40.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 42.3
Min nTPM: 24.2
RHH5202_R3573
39.8
RHH5230_R3602
42.3
RHH5259_R3631
24.2
RHH5288_R3660
35.6
Effector memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 46.0
Min nTPM: 28.9
RHH5203_R3574
28.9
RHH5231_R3603
46.0
RHH5260_R3632
38.8
RHH5289_R3661
43.7
MAIT T-cell nTPM: 38.7
Samples: 4
Max nTPM: 53.1
Min nTPM: 28.9
RHH5233_R3605
53.1
RHH5205_R3576
43.3
RHH5262_R3634
29.5
RHH5297_R3663
28.9
Memory CD4 T-cell TFH nTPM: 44.2
Samples: 4
Max nTPM: 49.5
Min nTPM: 32.8
RHH5300_R3666
32.8
RHH5236_R3608
49.5
RHH5265_R3637
45.1
RHH5208_R3579
49.2
Memory CD4 T-cell Th1 nTPM: 30.8
Samples: 4
Max nTPM: 33.2
Min nTPM: 29.1
RHH5210_R3581
29.2
RHH5302_R3668
31.8
RHH5238_R3610
33.2
RHH5267_R3639
29.1
Memory CD4 T-cell Th1/Th17 nTPM: 43.0
Samples: 4
Max nTPM: 50.0
Min nTPM: 37.5
RHH5303_R3669
37.5
RHH5211_R3582
43.0
RHH5239_R3611
50.0
RHH5268_R3640
41.3
Memory CD4 T-cell Th17 nTPM: 48.5
Samples: 4
Max nTPM: 56.8
Min nTPM: 43.5
RHH5304_R3670
49.1
RHH5212_R3583
56.8
RHH5240_R3612
44.6
RHH5269_R3641
43.5
Memory CD4 T-cell Th2 nTPM: 47.2
Samples: 4
Max nTPM: 55.4
Min nTPM: 40.2
RHH5305_R3671
40.2
RHH5213_R3584
55.4
RHH5241_R3613
44.2
RHH5270_R3642
48.9
Naive CD4 T-cell nTPM: 36.3
Samples: 4
Max nTPM: 50.0
Min nTPM: 28.8
RHH5306_R3672
33.6
RHH5214_R3585
28.8
RHH5242_R3614
32.7
RHH5271_R3643
50.0
Naive CD8 T-cell nTPM: 38.8
Samples: 4
Max nTPM: 44.4
Min nTPM: 34.5
RHH5201_R3572
34.5
RHH5229_R3601
35.0
RHH5258_R3630
41.4
RHH5287_R3659
44.4
Non-Vd2 gdTCR nTPM: 41.0
Samples: 4
Max nTPM: 49.2
Min nTPM: 26.2
RHH5235_R3607
43.8
RHH5264_R3636
44.9
RHH5207_R3578
49.2
RHH5299_R3665
26.2
T-reg nTPM: 41.8
Samples: 4
Max nTPM: 52.0
Min nTPM: 36.9
RHH5301_R3667
38.5
RHH5237_R3609
52.0
RHH5266_R3638
36.9
RHH5209_R3580
39.6
Terminal effector memory CD4 T-cell nTPM: 33.8
Samples: 2
Max nTPM: 42.6
Min nTPM: 25.0
RHH5243_R3615
42.6
RHH5272_R3644
25.0
Terminal effector memory CD8 T-cell nTPM: 41.7
Samples: 4
Max nTPM: 45.4
Min nTPM: 35.9
RHH5232_R3604
35.9
RHH5204_R3575
40.7
RHH5261_R3633
45.4
RHH5296_R3662
44.8
Vd2 gdTCR nTPM: 43.0
Samples: 4
Max nTPM: 56.7
Min nTPM: 32.1
RHH5234_R3606
41.8
RHH5206_R3577
56.7
RHH5263_R3635
32.1
RHH5298_R3664
41.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
