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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
92.6
nTPM
FANTOM5:
12.8
Scaled Tags Per Million
Pig:
8.5
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
92.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 92.6
1984
Male, age 76, both hemispheres
103.8
2090
Male, age 80, both hemispheres
94.2
2301
Female, age 85, both hemispheres
93.0
2188
Female, age 91, both hemispheres
79.3
Dorsal cochlear nucleus nTPM: 65.9
2378
Male, age 80, both hemispheres
75.4
2187
Female, age 91, both hemispheres
73.7
2370
Male, age 61, both hemispheres
64.3
2058
Male, age 76, both hemispheres
59.9
2802
Male, age 74, right hemisphere
56.2
Dorsal tegmental nucleus nTPM: 80.7
2358
Male, age 61, both hemispheres
116.9
2083
Male, age 80, both hemispheres
72.9
1936
Male, age 76, left hemisphere
68.9
2326
Male, age 74, both hemispheres
64.0
Dorsolateral tegmental area nTPM: 84.1
2337
Male, age 61, both hemispheres
112.2
2360
Male, age 74, both hemispheres
93.1
2141
Male, age 76, both hemispheres
80.8
2654
Male, age 80, both hemispheres
71.3
2751
Female, age 85, both hemispheres
63.2
Kolliker-Fuse nucleus nTPM: 69.8
2315
Male, age 76, right hemisphere
72.4
2163
Male, age 80, both hemispheres
71.7
2793
Female, age 91, left hemisphere
65.4
Lateral lemniscal nuclei nTPM: 52.9
2169
Male, age 76, both hemispheres
63.2
2746
Female, age 85, left hemisphere
59.7
2320
Female, age 91, left hemisphere
54.3
2453
Male, age 74, right hemisphere
44.8
2036
Male, age 80, both hemispheres
42.7
Lateral parabrachial nucleus nTPM: 69.4
2792
Male, age 76, both hemispheres
80.9
2139
Female, age 85, right hemisphere
78.3
2013
Male, age 80, both hemispheres
69.9
2790
Male, age 61, both hemispheres
48.4
Lateral vestibular nucleus nTPM: 84.1
2311
Male, age 80, both hemispheres
101.8
2184
Male, age 76, both hemispheres
66.4
Locus coeruleus nTPM: 78.6
2162
Male, age 80, both hemispheres
88.2
2123
Female, age 91, both hemispheres
83.5
2720
Male, age 74, both hemispheres
83.3
2317
Female, age 72, unknown
78.2
2014
Male, age 55, unknown
74.2
1980
Male, age 76, both hemispheres
72.9
2788
Male, age 74, unknown
69.7
Medial parabrachial nucleus nTPM: 73.5
2170
Female, age 91, both hemispheres
84.5
2463
Female, age 85, right hemisphere
75.3
2786
Male, age 76, both hemispheres
73.5
2854
Male, age 80, both hemispheres
71.6
2156
Male, age 61, both hemispheres
62.4
Medial periolivary nuclei nTPM: 61.8
2081
Male, age 80, both hemispheres
70.4
2063
Male, age 76, both hemispheres
62.1
2791
Male, age 74, right hemisphere
60.8
2458
Female, age 91, both hemispheres
59.9
2171
Female, age 85, both hemispheres
56.1
Motor facial nucleus nTPM: 63.1
2365
Male, age 74, right hemisphere
78.1
2697
Female, age 85, both hemispheres
76.1
2126
Male, age 61, both hemispheres
70.7
2062
Male, age 76, both hemispheres
57.1
2327
Male, age 80, both hemispheres
49.3
2795
Female, age 91, both hemispheres
47.6
Motor trigeminal nucleus nTPM: 71.3
2335
Male, age 61, both hemispheres
95.8
2321
Female, age 91, both hemispheres
75.2
2309
Male, age 76, both hemispheres
71.0
2079
Male, age 80, both hemispheres
63.0
2560
Male, age 74, both hemispheres
51.6
Nuclei of the trapezoid body nTPM: 56.9
1983
Male, age 76, both hemispheres
75.3
2166
Male, age 80, both hemispheres
64.0
2159
Male, age 61, both hemispheres
60.7
2735
Female, age 85, both hemispheres
44.7
2368
Female, age 91, both hemispheres
39.8
Nucleus raphe magnus nTPM: 58.2
2051
Male, age 76, both hemispheres
65.3
2455
Male, age 74, both hemispheres
63.5
2328
Male, age 80, both hemispheres
59.5
2160
Male, age 61, both hemispheres
56.4
2172
Female, age 85, both hemispheres
54.8
2459
Female, age 91, both hemispheres
49.7
Paramedian reticular nucleus nTPM: 61.3
2052
Male, age 76, both hemispheres
69.0
2313
Male, age 61, both hemispheres
63.1
2050
Female, age 85, both hemispheres
57.9
2057
Male, age 80, both hemispheres
55.4
Pedunculopontine tegmental nucleus nTPM: 86.7
2338
Male, age 61, both hemispheres
116.0
2334
Male, age 80, both hemispheres
77.2
1921
Female, age 85, both hemispheres
66.7
Pontine nuclei nTPM: 57.3
2109
Female, age 72, unknown
65.9
2115
Male, age 80, left hemisphere
65.7
2787
Female, age 85, both hemispheres
61.9
2319
Female, age 91, both hemispheres
61.8
1968
Male, age 76, left hemisphere
60.0
2454
Male, age 74, left hemisphere
49.1
1863
Male, age 55, unknown
48.9
2727
Male, age 61, right hemisphere
45.0
Pontine raphe nucleus nTPM: 59.5
2853
Male, age 76, midline
62.2
2122
Female, age 85, midline
56.9
Posteroventral cochlear nucleus nTPM: 72.4
2135
Female, age 91, both hemispheres
86.5
2341
Male, age 80, both hemispheres
83.7
2070
Male, age 76, both hemispheres
75.9
2752
Female, age 85, both hemispheres
65.8
2371
Male, age 61, both hemispheres
50.0
Principal sensory trigeminal nucleus nTPM: 58.5
2324
Male, age 76, both hemispheres
69.0
2367
Female, age 91, left hemisphere
65.6
2158
Male, age 61, both hemispheres
53.8
2008
Male, age 80, left hemisphere
45.5
Reticular pontine nucleus, caudal nTPM: 56.8
2092
Male, age 76, both hemispheres
70.8
2559
Male, age 74, both hemispheres
56.4
2332
Male, age 80, right hemisphere
52.4
2457
Female, age 91, both hemispheres
47.5
Reticular pontine nucleus, oral nTPM: 61.4
2167
Male, age 76, both hemispheres
79.1
2366
Female, age 91, both hemispheres
65.6
1939
Male, age 80, both hemispheres
59.2
2012
Female, age 85, both hemispheres
56.6
2361
Male, age 74, both hemispheres
46.5
Reticulotegmental nucleus nTPM: 60.3
2333
Male, age 80, both hemispheres
64.3
2325
Male, age 76, both hemispheres
59.6
2322
Female, age 91, both hemispheres
59.1
2452
Male, age 74, both hemispheres
58.3
Spinal trigeminal nucleus, oral nTPM: 73.0
1978
Male, age 76, both hemispheres
82.3
2164
Male, age 80, both hemispheres
70.0
2737
Female, age 85, both hemispheres
66.6
Subcoeruleus area nTPM: 64.5
2323
Female, age 91, left hemisphere
72.7
2451
Male, age 74, both hemispheres
63.1
2369
Female, age 85, left hemisphere
62.7
2089
Male, age 76, left hemisphere
62.0
1958
Male, age 80, both hemispheres
61.8
Superior olive nTPM: 64.1
2364
Male, age 74, right hemisphere
85.1
2020
Male, age 76, both hemispheres
71.8
2329
Male, age 80, right hemisphere
63.0
2561
Female, age 91, both hemispheres
52.3
1875
Female, age 85, both hemispheres
48.1
Ventral periolivary nuclei nTPM: 58.6
2130
Female, age 85, both hemispheres
69.3
2165
Male, age 80, both hemispheres
63.4
2023
Male, age 76, both hemispheres
50.9
2794
Female, age 91, left hemisphere
50.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 64.8
2359
Male, age 61, both hemispheres
84.1
2840
Female, age 85, both hemispheres
69.7
2161
Male, age 80, both hemispheres
69.4
1959
Male, age 76, both hemispheres
58.9
2449
Male, age 74, both hemispheres
56.1
2456
Female, age 91, both hemispheres
50.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
