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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
463.8
nTPM
FANTOM5:
530.4
Scaled Tags Per Million
Pig:
562.1
nTPM
Allen mouse:
14.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
463.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 328.6
2301
Female, age 85, both hemispheres
371.7
2188
Female, age 91, both hemispheres
344.9
2090
Male, age 80, both hemispheres
303.4
1984
Male, age 76, both hemispheres
294.5
Dorsal cochlear nucleus nTPM: 314.0
2187
Female, age 91, both hemispheres
365.3
2802
Male, age 74, right hemisphere
345.4
2058
Male, age 76, both hemispheres
300.0
2370
Male, age 61, both hemispheres
289.8
2378
Male, age 80, both hemispheres
269.3
Dorsal tegmental nucleus nTPM: 336.4
2083
Male, age 80, both hemispheres
383.5
2358
Male, age 61, both hemispheres
356.9
2326
Male, age 74, both hemispheres
318.1
1936
Male, age 76, left hemisphere
287.2
Dorsolateral tegmental area nTPM: 338.8
2751
Female, age 85, both hemispheres
381.1
2654
Male, age 80, both hemispheres
366.7
2141
Male, age 76, both hemispheres
339.3
2337
Male, age 61, both hemispheres
312.3
2360
Male, age 74, both hemispheres
294.4
Kolliker-Fuse nucleus nTPM: 366.6
2793
Female, age 91, left hemisphere
401.2
2163
Male, age 80, both hemispheres
393.1
2315
Male, age 76, right hemisphere
305.7
Lateral lemniscal nuclei nTPM: 420.8
2169
Male, age 76, both hemispheres
508.5
2036
Male, age 80, both hemispheres
453.7
2746
Female, age 85, left hemisphere
432.3
2453
Male, age 74, right hemisphere
378.2
2320
Female, age 91, left hemisphere
331.1
Lateral parabrachial nucleus nTPM: 379.6
2139
Female, age 85, right hemisphere
470.0
2013
Male, age 80, both hemispheres
373.8
2790
Male, age 61, both hemispheres
349.0
2792
Male, age 76, both hemispheres
325.6
Lateral vestibular nucleus nTPM: 360.9
2184
Male, age 76, both hemispheres
370.9
2311
Male, age 80, both hemispheres
350.8
Locus coeruleus nTPM: 404.3
2123
Female, age 91, both hemispheres
462.3
2014
Male, age 55, unknown
449.8
2720
Male, age 74, both hemispheres
438.0
2788
Male, age 74, unknown
387.1
2317
Female, age 72, unknown
379.2
2162
Male, age 80, both hemispheres
358.3
1980
Male, age 76, both hemispheres
355.3
Medial parabrachial nucleus nTPM: 372.5
2854
Male, age 80, both hemispheres
434.8
2170
Female, age 91, both hemispheres
434.2
2156
Male, age 61, both hemispheres
348.9
2786
Male, age 76, both hemispheres
334.9
2463
Female, age 85, right hemisphere
310.0
Medial periolivary nuclei nTPM: 397.2
2171
Female, age 85, both hemispheres
497.1
2063
Male, age 76, both hemispheres
483.4
2791
Male, age 74, right hemisphere
407.7
2081
Male, age 80, both hemispheres
307.0
2458
Female, age 91, both hemispheres
290.7
Motor facial nucleus nTPM: 407.1
2062
Male, age 76, both hemispheres
492.3
2697
Female, age 85, both hemispheres
459.0
2365
Male, age 74, right hemisphere
446.8
2327
Male, age 80, both hemispheres
370.3
2795
Female, age 91, both hemispheres
342.3
2126
Male, age 61, both hemispheres
331.8
Motor trigeminal nucleus nTPM: 349.2
2079
Male, age 80, both hemispheres
382.4
2560
Male, age 74, both hemispheres
374.6
2335
Male, age 61, both hemispheres
349.8
2309
Male, age 76, both hemispheres
330.1
2321
Female, age 91, both hemispheres
309.0
Nuclei of the trapezoid body nTPM: 430.6
2159
Male, age 61, both hemispheres
558.7
1983
Male, age 76, both hemispheres
473.6
2735
Female, age 85, both hemispheres
465.7
2166
Male, age 80, both hemispheres
362.4
2368
Female, age 91, both hemispheres
292.7
Nucleus raphe magnus nTPM: 451.6
2160
Male, age 61, both hemispheres
632.1
2172
Female, age 85, both hemispheres
520.8
2051
Male, age 76, both hemispheres
442.7
2455
Male, age 74, both hemispheres
432.6
2328
Male, age 80, both hemispheres
375.1
2459
Female, age 91, both hemispheres
306.2
Paramedian reticular nucleus nTPM: 394.8
2050
Female, age 85, both hemispheres
501.1
2313
Male, age 61, both hemispheres
393.2
2057
Male, age 80, both hemispheres
373.8
2052
Male, age 76, both hemispheres
311.2
Pedunculopontine tegmental nucleus nTPM: 373.0
1921
Female, age 85, both hemispheres
380.8
2334
Male, age 80, both hemispheres
374.6
2338
Male, age 61, both hemispheres
363.5
Pontine nuclei nTPM: 463.8
2787
Female, age 85, both hemispheres
620.8
1863
Male, age 55, unknown
575.0
2727
Male, age 61, right hemisphere
522.7
2109
Female, age 72, unknown
462.7
1968
Male, age 76, left hemisphere
455.8
2454
Male, age 74, left hemisphere
405.1
2319
Female, age 91, both hemispheres
344.4
2115
Male, age 80, left hemisphere
324.0
Pontine raphe nucleus nTPM: 413.8
2122
Female, age 85, midline
448.9
2853
Male, age 76, midline
378.8
Posteroventral cochlear nucleus nTPM: 322.7
2752
Female, age 85, both hemispheres
373.8
2070
Male, age 76, both hemispheres
360.5
2135
Female, age 91, both hemispheres
307.2
2371
Male, age 61, both hemispheres
287.1
2341
Male, age 80, both hemispheres
284.7
Principal sensory trigeminal nucleus nTPM: 413.4
2158
Male, age 61, both hemispheres
553.0
2008
Male, age 80, left hemisphere
413.7
2367
Female, age 91, left hemisphere
344.4
2324
Male, age 76, both hemispheres
342.5
Reticular pontine nucleus, caudal nTPM: 370.7
2092
Male, age 76, both hemispheres
426.4
2332
Male, age 80, right hemisphere
393.4
2559
Male, age 74, both hemispheres
360.1
2457
Female, age 91, both hemispheres
302.9
Reticular pontine nucleus, oral nTPM: 388.5
2012
Female, age 85, both hemispheres
444.3
2361
Male, age 74, both hemispheres
425.8
1939
Male, age 80, both hemispheres
382.3
2167
Male, age 76, both hemispheres
349.2
2366
Female, age 91, both hemispheres
340.6
Reticulotegmental nucleus nTPM: 356.1
2325
Male, age 76, both hemispheres
407.8
2322
Female, age 91, both hemispheres
340.9
2452
Male, age 74, both hemispheres
340.8
2333
Male, age 80, both hemispheres
334.8
Spinal trigeminal nucleus, oral nTPM: 338.3
2737
Female, age 85, both hemispheres
353.2
2164
Male, age 80, both hemispheres
339.6
1978
Male, age 76, both hemispheres
322.0
Subcoeruleus area nTPM: 374.0
1958
Male, age 80, both hemispheres
418.9
2323
Female, age 91, left hemisphere
418.1
2089
Male, age 76, left hemisphere
385.4
2369
Female, age 85, left hemisphere
348.8
2451
Male, age 74, both hemispheres
298.8
Superior olive nTPM: 418.8
1875
Female, age 85, both hemispheres
527.5
2364
Male, age 74, right hemisphere
433.8
2020
Male, age 76, both hemispheres
428.8
2329
Male, age 80, right hemisphere
373.1
2561
Female, age 91, both hemispheres
330.5
Ventral periolivary nuclei nTPM: 410.6
2130
Female, age 85, both hemispheres
487.9
2165
Male, age 80, both hemispheres
426.4
2023
Male, age 76, both hemispheres
411.0
2794
Female, age 91, left hemisphere
316.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 382.4
2840
Female, age 85, both hemispheres
457.8
1959
Male, age 76, both hemispheres
436.3
2449
Male, age 74, both hemispheres
402.3
2359
Male, age 61, both hemispheres
357.4
2161
Male, age 80, both hemispheres
348.4
2456
Female, age 91, both hemispheres
292.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
562.1
Pig sample
Sample description
nTPM
Pons nTPM: 562.1
Samples: 4
Max nTPM: 791.5
Min nTPM: 435.8
Sample A
Female
791.5
Sample B
Female
435.8
Sample C
Male
461.4
Sample D
Male
559.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
