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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.5
nTPM
Monaco:
166.3
nTPM
Schmiedel:
160.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.5
HPA sample
nTPM
gdT-cell nTPM: 8.1
Samples: 6
Max nTPM: 11.9
Min nTPM: 6.0
P10809_1007
7.2
P10809_1022
7.2
P10809_1041
6.0
P10809_1060
9.4
P10809_1077
6.7
P10809_1098
11.9
MAIT T-cell nTPM: 9.7
Samples: 6
Max nTPM: 11.8
Min nTPM: 5.8
P10809_1006
9.9
P10809_1024
10.3
P10809_1043
5.8
P10809_1062
11.8
P10809_1083
10.3
P10809_1097
10.0
Memory CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 16.3
Min nTPM: 8.1
P10809_1014
14.4
P10809_1026
11.7
P10809_1045
8.1
P10809_1064
8.9
P10809_1086
12.3
P10809_1113
16.3
Memory CD8 T-cell nTPM: 9.1
Samples: 5
Max nTPM: 15.7
Min nTPM: 5.8
P10809_1012
10.9
P10809_1027
6.2
P10809_1046
5.8
P10809_1065
7.0
P10809_1111
15.7
Naive CD4 T-cell nTPM: 16.6
Samples: 6
Max nTPM: 25.8
Min nTPM: 7.4
P10809_1015
25.8
P10809_1030
11.5
P10809_1049
7.4
P10809_1068
20.4
P10809_1085
13.5
P10809_1112
21.2
Naive CD8 T-cell nTPM: 11.6
Samples: 6
Max nTPM: 15.7
Min nTPM: 8.9
P10809_1016
15.2
P10809_1031
9.1
P10809_1050
8.9
P10809_1069
9.7
P10809_1087
10.9
P10809_1110
15.7
T-reg nTPM: 19.5
Samples: 6
Max nTPM: 28.2
Min nTPM: 15.3
P10809_1018
19.8
P10809_1037
22.1
P10809_1056
15.3
P10809_1075
15.8
P10809_1094
15.6
P10809_1106
28.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 140.4
Samples: 4
Max nTPM: 173.4
Min nTPM: 124.5
RHH5202_R3573
133.1
RHH5230_R3602
173.4
RHH5259_R3631
124.5
RHH5288_R3660
130.5
Effector memory CD8 T-cell nTPM: 110.6
Samples: 4
Max nTPM: 123.5
Min nTPM: 104.8
RHH5203_R3574
123.5
RHH5231_R3603
105.8
RHH5260_R3632
104.8
RHH5289_R3661
108.1
MAIT T-cell nTPM: 95.4
Samples: 4
Max nTPM: 119.5
Min nTPM: 78.6
RHH5233_R3605
90.3
RHH5205_R3576
119.5
RHH5262_R3634
78.6
RHH5297_R3663
93.0
Memory CD4 T-cell TFH nTPM: 113.8
Samples: 4
Max nTPM: 138.8
Min nTPM: 100.9
RHH5300_R3666
100.9
RHH5236_R3608
138.8
RHH5265_R3637
113.7
RHH5208_R3579
101.6
Memory CD4 T-cell Th1 nTPM: 150.8
Samples: 4
Max nTPM: 183.2
Min nTPM: 128.5
RHH5210_R3581
157.2
RHH5302_R3668
134.2
RHH5238_R3610
183.2
RHH5267_R3639
128.5
Memory CD4 T-cell Th1/Th17 nTPM: 140.8
Samples: 4
Max nTPM: 211.2
Min nTPM: 101.7
RHH5303_R3669
101.7
RHH5211_R3582
134.4
RHH5239_R3611
211.2
RHH5268_R3640
116.0
Memory CD4 T-cell Th17 nTPM: 121.6
Samples: 4
Max nTPM: 147.0
Min nTPM: 105.4
RHH5304_R3670
112.9
RHH5212_R3583
105.4
RHH5240_R3612
147.0
RHH5269_R3641
121.2
Memory CD4 T-cell Th2 nTPM: 116.3
Samples: 4
Max nTPM: 139.7
Min nTPM: 102.6
RHH5305_R3671
139.7
RHH5213_R3584
102.6
RHH5241_R3613
113.2
RHH5270_R3642
109.6
Naive CD4 T-cell nTPM: 166.3
Samples: 4
Max nTPM: 185.8
Min nTPM: 152.0
RHH5306_R3672
161.1
RHH5214_R3585
166.1
RHH5242_R3614
152.0
RHH5271_R3643
185.8
Naive CD8 T-cell nTPM: 161.7
Samples: 4
Max nTPM: 242.6
Min nTPM: 109.4
RHH5201_R3572
149.5
RHH5229_R3601
242.6
RHH5258_R3630
109.4
RHH5287_R3659
145.1
Non-Vd2 gdTCR nTPM: 101.2
Samples: 4
Max nTPM: 121.3
Min nTPM: 81.0
RHH5235_R3607
121.3
RHH5264_R3636
97.4
RHH5207_R3578
105.2
RHH5299_R3665
81.0
T-reg nTPM: 144.7
Samples: 4
Max nTPM: 166.8
Min nTPM: 130.8
RHH5301_R3667
137.1
RHH5237_R3609
144.0
RHH5266_R3638
130.8
RHH5209_R3580
166.8
Terminal effector memory CD4 T-cell nTPM: 106.0
Samples: 2
Max nTPM: 108.0
Min nTPM: 103.9
RHH5243_R3615
103.9
RHH5272_R3644
108.0
Terminal effector memory CD8 T-cell nTPM: 93.3
Samples: 4
Max nTPM: 98.0
Min nTPM: 83.5
RHH5232_R3604
97.2
RHH5204_R3575
83.5
RHH5261_R3633
94.6
RHH5296_R3662
98.0
Vd2 gdTCR nTPM: 112.6
Samples: 4
Max nTPM: 125.7
Min nTPM: 99.1
RHH5234_R3606
120.2
RHH5206_R3577
105.2
RHH5263_R3635
125.7
RHH5298_R3664
99.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
