HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.3 nTPM
HPA Brain:33.0 nTPM
GTEx:15.3 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:7.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040234
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
2529 Female, age 94, left hemisphere 33.8
2148 Female, age 91, left hemisphere 29.6
1855 Male, age 76, left hemisphere 28.2
2621 Female, age 67, right hemisphere 27.8
1898 Male, age 80, left hemisphere 26.6
1911 Female, age 85, right hemisphere 22.5
Dentate gyrus
nTPM: 29.3
2531 Female, age 67, both hemispheres 33.3
2530 Female, age 94, left hemisphere 30.7
2246 Female, age 85, both hemispheres 30.1
1927 Female, age 91, both hemispheres 27.8
2528 Male, age 74, both hemispheres 27.6
2010 Male, age 76, both hemispheres 26.4
Entorhinal gyrus
nTPM: 33.0
2613 Female, age 94, left hemisphere 36.0
1787 Male, age 76, left hemisphere 35.8
2764 Male, age 80, right hemisphere 34.9
2686 Male, age 75, right hemisphere 33.4
1938 Female, age 85, left hemisphere 30.1
2117 Female, age 91, right hemisphere 27.6
Hippocampus, CA1
nTPM: 28.9
2749 Male, age 80, left hemisphere 31.3
2082 Female, age 91, right hemisphere 29.5
2527 Male, age 74, both hemispheres 28.8
2045 Male, age 76, both hemispheres 27.6
1873 Female, age 85, both hemispheres 27.2
Hippocampus, CA2
nTPM: 27.0
2437 Female, age 94, left hemisphere 30.8
1892 Male, age 76, both hemispheres 29.0
2113 Female, age 91, right hemisphere 28.1
1940 Female, age 85, left hemisphere 26.4
2249 Male, age 74, both hemispheres 24.7
1963 Male, age 80, left hemisphere 22.8
Hippocampus, CA3
nTPM: 31.5
2620 Female, age 94, left hemisphere 39.8
2861 Female, age 67, both hemispheres 33.4
1867 Male, age 76, both hemispheres 31.6
2137 Male, age 80, left hemisphere 30.7
2436 Male, age 74, both hemispheres 27.4
1891 Female, age 85, both hemispheres 25.9
Parahippocampal cortex
nTPM: 31.7
2622 Female, age 67, right hemisphere 35.0
1990 Female, age 91, right hemisphere 34.2
1850 Male, age 80, both hemispheres 32.5
2692 Male, age 74, both hemispheres 32.5
2532 Female, age 72, left hemisphere 32.0
1933 Female, age 85, both hemispheres 31.8
2693 Female, age 94, both hemispheres 30.7
2250 Female, age 67, right hemisphere 30.1
2018 Male, age 76, both hemispheres 29.0
2245 Female, age 91, both hemispheres 28.7
Perirhinal gyrus
nTPM: 32.5
1847 Female, age 91, left hemisphere 37.5
2848 Male, age 76, right hemisphere 32.5
1794 Male, age 80, right hemisphere 32.3
1841 Female, age 85, right hemisphere 31.2
2521 Female, age 94, right hemisphere 29.1
Subiculum
nTPM: 29.4
2438 Female, age 94, left hemisphere 33.3
2619 Male, age 74, both hemispheres 33.2
1977 Female, age 85, both hemispheres 30.2
1901 Male, age 80, both hemispheres 28.6
2042 Male, age 76, both hemispheres 26.5
2729 Female, age 91, right hemisphere 24.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 35.5
Min nTPM: 6.5
Std nTPM: 4.6
Median nTPM: 15.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 35.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 29.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 24.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10153-102I9 76 years, female 43.1
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.1
Sample A Female 9.4
Sample B Female 7.1
Sample C Male 8.9
Sample D Male 7.4
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.8
Sample A Female 9.2
Sample B Female 8.5
Sample C Male 7.9
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.4
Sample A Female 8.3
Sample B Female 6.4
Sample C Male 8.5
Sample D Male 7.3
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.4
Sample A Female 9.6
Sample B Female 6.4
Sample C Male 10.8
Sample D Male 8.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.3
Sample A Male 8.3
Sample B Male 7.3
Sample C Female 7.5
Sample D Female 8.4
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 8.1
Sample C Female 7.2
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74822874 Antisense, RP_051121_03_H02, Mouse strain C57BL/6J (56 days, male) 0.1

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