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ZDBF2
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  • ZDBF2
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZDBF2
Synonyms FLJ45338, KIAA1571
Gene descriptioni

Full gene name according to HGNC.

Zinc finger DBF-type containing 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q33.3
Chromosome location (bp) 206274663 - 206314427
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000204186 (version 109)
Entrez gene 57683
HGNC HGNC:29313
UniProt Q9HCK1 (UniProt - Evidence at protein level)
neXtProt NX_Q9HCK1
GeneCards ZDBF2
Antibodypedia ZDBF2 antibodies


PROTEIN FUNCTION
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein containing DBF4-type zinc finger domains. This gene is imprinted and paternally expressed in lymphocytes but is more stochastically expressed in the placenta. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZDBF2-201
ENSP00000363545
ENST00000374423
Q9HCK1
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
N0DVB2
[Target identity:100%; Query identity:100%] Zinc finger DBF-type containing 2 vesion 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0005634 [nucleus]
GO:0008270 [zinc ion binding]
GO:0043045 [DNA methylation involved in embryo development]
GO:0046872 [metal ion binding]
GO:0071514 [genomic imprinting]
Show all
2354 aa
265.6 kDa
No 0
ZDBF2-202
ENSP00000478626
ENST00000611847
N0DVX5
[Direct mapping] DBF4-type zinc finger-containing protein 2; Zinc finger DBF-type containing 2 vesion 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
2352 aa
265.1 kDa
No 0
ZDBF2-206
ENSP00000496863
ENST00000649441
A0A3B3IRN6
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0005634 [nucleus]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
838 aa
93.9 kDa
No 0
ZDBF2-207
ENSP00000497803
ENST00000649525
A0A3B3ITZ5
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0005634 [nucleus]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
1424 aa
160.4 kDa
No 0
ZDBF2-208
ENSP00000497308
ENST00000649650
Q9HCK1
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
N0DVB2
[Target identity:100%; Query identity:100%] Zinc finger DBF-type containing 2 vesion 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0005634 [nucleus]
GO:0008270 [zinc ion binding]
GO:0043045 [DNA methylation involved in embryo development]
GO:0046872 [metal ion binding]
GO:0071514 [genomic imprinting]
Show all
2354 aa
265.6 kDa
No 0
ZDBF2-209
ENSP00000497521
ENST00000649998
A0A3B3ISF7
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
753 aa
84.1 kDa
No 0
ZDBF2-210
ENSP00000497304
ENST00000650097
A0A3B3ISJ7
[Direct mapping] DBF4-type zinc finger-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0005634 [nucleus]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
782 aa
87.6 kDa
No 0

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