HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.8 nTPM
HPA Brain:133.1 nTPM
GTEx:28.8 nTPM
FANTOM5:461.5 Scaled Tags Per Million
Pig:162.9 nTPM
Mouse:92.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055149Antibody HPA059099
Glial cells Not detectedNot detected
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.1
Sample id Sample description nTPM
Hippocampus
nTPM: 48.5
2621 Female, age 67, right hemisphere 82.6
2529 Female, age 94, left hemisphere 63.4
1911 Female, age 85, right hemisphere 55.8
1898 Male, age 80, left hemisphere 42.0
2148 Female, age 91, left hemisphere 26.6
1855 Male, age 76, left hemisphere 20.4
Dentate gyrus
nTPM: 133.1
2530 Female, age 94, left hemisphere 628.6
2010 Male, age 76, both hemispheres 59.0
1927 Female, age 91, both hemispheres 40.4
2246 Female, age 85, both hemispheres 30.0
2531 Female, age 67, both hemispheres 26.1
2528 Male, age 74, both hemispheres 14.5
Entorhinal gyrus
nTPM: 93.0
2613 Female, age 94, left hemisphere 382.4
2686 Male, age 75, right hemisphere 55.4
1938 Female, age 85, left hemisphere 43.3
1787 Male, age 76, left hemisphere 32.3
2764 Male, age 80, right hemisphere 31.9
2117 Female, age 91, right hemisphere 12.6
Hippocampus, CA1
nTPM: 45.3
2749 Male, age 80, left hemisphere 75.4
2527 Male, age 74, both hemispheres 67.2
1873 Female, age 85, both hemispheres 42.8
2045 Male, age 76, both hemispheres 32.3
2082 Female, age 91, right hemisphere 9.1
Hippocampus, CA2
nTPM: 91.0
2437 Female, age 94, left hemisphere 366.7
1892 Male, age 76, both hemispheres 63.1
2249 Male, age 74, both hemispheres 46.3
1963 Male, age 80, left hemisphere 33.1
1940 Female, age 85, left hemisphere 19.3
2113 Female, age 91, right hemisphere 17.2
Hippocampus, CA3
nTPM: 48.2
2137 Male, age 80, left hemisphere 81.6
2861 Female, age 67, both hemispheres 70.0
1867 Male, age 76, both hemispheres 66.8
2436 Male, age 74, both hemispheres 42.0
1891 Female, age 85, both hemispheres 20.8
2620 Female, age 94, left hemisphere 8.0
Parahippocampal cortex
nTPM: 45.1
2245 Female, age 91, both hemispheres 115.0
2250 Female, age 67, right hemisphere 54.8
2692 Male, age 74, both hemispheres 48.2
2532 Female, age 72, left hemisphere 44.3
2018 Male, age 76, both hemispheres 43.3
2622 Female, age 67, right hemisphere 35.0
1850 Male, age 80, both hemispheres 34.8
1933 Female, age 85, both hemispheres 34.0
1990 Female, age 91, right hemisphere 26.0
2693 Female, age 94, both hemispheres 15.7
Perirhinal gyrus
nTPM: 32.6
1847 Female, age 91, left hemisphere 59.0
1794 Male, age 80, right hemisphere 32.1
2848 Male, age 76, right hemisphere 31.0
1841 Female, age 85, right hemisphere 29.0
2521 Female, age 94, right hemisphere 11.7
Subiculum
nTPM: 42.6
2438 Female, age 94, left hemisphere 72.9
1901 Male, age 80, both hemispheres 72.5
2042 Male, age 76, both hemispheres 49.1
1977 Female, age 85, both hemispheres 24.6
2619 Male, age 74, both hemispheres 22.6
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.8
Samples: 197

Max nTPM: 147.5
Min nTPM: 1.6
Std nTPM: 24.9
Median nTPM: 20.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 147.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 127.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 118.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 105.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 86.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 83.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 82.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 81.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 80.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 80.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 79.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 461.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 461.5
FF:10169-103B7 60 years, female 550.4
FF:10153-102I9 76 years, female 372.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 162.9
Pig sample Sample description nTPM
Subiculum
nTPM: 119.7
Samples: 4

Max nTPM: 149.5
Min nTPM: 104.9
Sample A Female 149.5
Sample B Female 106.1
Sample C Male 118.1
Sample D Male 104.9
Dorsal hippocampus
nTPM: 163.0
Samples: 4

Max nTPM: 213.9
Min nTPM: 120.1
Sample A Female 213.9
Sample B Female 164.0
Sample C Male 153.8
Sample D Male 120.1
Entorhinal cortex
nTPM: 126.4
Samples: 4

Max nTPM: 141.9
Min nTPM: 112.3
Sample A Female 141.9
Sample B Female 112.3
Sample C Male 124.0
Sample D Male 127.4
Ventral hippocampus
nTPM: 148.8
Samples: 4

Max nTPM: 197.3
Min nTPM: 96.1
Sample A Female 143.6
Sample B Female 96.1
Sample C Male 158.1
Sample D Male 197.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 67.7
Min nTPM: 49.2
Sample A Male 54.8
Sample B Male 49.2
Sample C Female 65.5
Sample D Female 67.7
Hippocampal formation
nTPM: 92.4
Samples: 4

Max nTPM: 107.4
Min nTPM: 76.7
Sample A Male 76.7
Sample B Male 97.8
Sample C Female 107.4
Sample D Female 87.6

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