HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.2 nTPM
HPA Brain:34.0 nTPM
GTEx:22.2 nTPM
FANTOM5:36.3 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:35.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023054Antibody HPA023135
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
1898 Male, age 80, left hemisphere 35.6
2621 Female, age 67, right hemisphere 31.8
2529 Female, age 94, left hemisphere 30.7
2148 Female, age 91, left hemisphere 28.5
1855 Male, age 76, left hemisphere 26.6
1911 Female, age 85, right hemisphere 22.0
Dentate gyrus
nTPM: 30.7
2530 Female, age 94, left hemisphere 40.9
1927 Female, age 91, both hemispheres 31.2
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 27.5
2010 Male, age 76, both hemispheres 27.2
2531 Female, age 67, both hemispheres 26.8
Entorhinal gyrus
nTPM: 31.7
2764 Male, age 80, right hemisphere 37.4
2613 Female, age 94, left hemisphere 33.5
1938 Female, age 85, left hemisphere 32.3
1787 Male, age 76, left hemisphere 32.0
2117 Female, age 91, right hemisphere 31.1
2686 Male, age 75, right hemisphere 24.1
Hippocampus, CA1
nTPM: 31.0
2749 Male, age 80, left hemisphere 41.7
1873 Female, age 85, both hemispheres 32.0
2527 Male, age 74, both hemispheres 29.5
2082 Female, age 91, right hemisphere 28.2
2045 Male, age 76, both hemispheres 23.6
Hippocampus, CA2
nTPM: 32.6
1963 Male, age 80, left hemisphere 40.5
2249 Male, age 74, both hemispheres 35.0
1892 Male, age 76, both hemispheres 33.6
2437 Female, age 94, left hemisphere 32.6
2113 Female, age 91, right hemisphere 28.2
1940 Female, age 85, left hemisphere 25.7
Hippocampus, CA3
nTPM: 30.3
2436 Male, age 74, both hemispheres 33.9
2620 Female, age 94, left hemisphere 33.4
1867 Male, age 76, both hemispheres 31.5
2137 Male, age 80, left hemisphere 30.4
2861 Female, age 67, both hemispheres 26.8
1891 Female, age 85, both hemispheres 25.6
Parahippocampal cortex
nTPM: 28.9
1850 Male, age 80, both hemispheres 32.8
1933 Female, age 85, both hemispheres 32.8
1990 Female, age 91, right hemisphere 31.6
2250 Female, age 67, right hemisphere 30.8
2245 Female, age 91, both hemispheres 30.6
2692 Male, age 74, both hemispheres 28.3
2532 Female, age 72, left hemisphere 27.4
2622 Female, age 67, right hemisphere 27.3
2693 Female, age 94, both hemispheres 24.9
2018 Male, age 76, both hemispheres 22.6
Perirhinal gyrus
nTPM: 34.0
1794 Male, age 80, right hemisphere 40.4
1847 Female, age 91, left hemisphere 35.7
2521 Female, age 94, right hemisphere 32.4
1841 Female, age 85, right hemisphere 31.7
2848 Male, age 76, right hemisphere 29.7
Subiculum
nTPM: 27.5
2619 Male, age 74, both hemispheres 32.0
1977 Female, age 85, both hemispheres 31.0
1901 Male, age 80, both hemispheres 30.8
2438 Female, age 94, left hemisphere 25.2
2729 Female, age 91, right hemisphere 24.5
2042 Male, age 76, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 46.7
Min nTPM: 11.9
Std nTPM: 5.3
Median nTPM: 21.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 37.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 33.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 32.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 31.9
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.3
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 29.9
Min nTPM: 18.0
Sample A Female 29.9
Sample B Female 18.0
Sample C Male 20.2
Sample D Male 19.6
Dorsal hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 18.7
Sample A Female 31.4
Sample B Female 20.6
Sample C Male 25.0
Sample D Male 18.7
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 23.8
Min nTPM: 20.2
Sample A Female 23.8
Sample B Female 23.5
Sample C Male 22.5
Sample D Male 20.2
Ventral hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 28.6
Min nTPM: 17.3
Sample A Female 27.0
Sample B Female 17.3
Sample C Male 28.6
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 34.7
Min nTPM: 26.9
Sample A Male 34.7
Sample B Male 30.9
Sample C Female 34.4
Sample D Female 26.9
Hippocampal formation
nTPM: 35.8
Samples: 4

Max nTPM: 40.1
Min nTPM: 33.1
Sample A Male 33.1
Sample B Male 36.2
Sample C Female 40.1
Sample D Female 33.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68191534 Antisense, RP_041129_01_D04, Mouse strain C57BL/6J (56 days, male) 0.7

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